Job Description P24169 Confidence 99.65% Date Thu Jan 5 11:40:44 GMT 2012 Rank 165 Aligned Residues 297 % Identity 13% Template d2gb3a1 SCOP info PLP-dependent transferase-like PLP-dependent transferases AAT-like Resolution 2.50

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		176	.	.	.	180	.	.	.	.	.	.	.	.								.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.
Query Sequence		P	C	I	A	Q	Q	H	A	A	K	V	F	N	.	.	.	.	.	.	.	A	D	K	T	Y	F	V	L	N	G	T	S	S	S	N	K	V	V	L	N	A	L	L	T	P	G	D	L	V	L	F	D	R	N	N	H	K	S	N	H	H	G	A	L	L	Q	A	G	A	T	P	V	Y	L	E	T	A	R	N	P
Query Conservation															.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.																																										.
Template Conservation																																																															.
Template Sequence		I	W	E	L	R	E	A	F	A	S	Y	Y	K	R	R	Q	R	V	D	V	K	P	E	N	V	L	V	T	N	G	G	S	E	A	I	L	F	S	F	A	V	I	A	N	P	G	D	E	I	L	V	L	E	P	F	Y	A	N	Y	N	A	.	F	A	K	I	A	G	V	K	L	I	P	V	T	R	R	X	E	E
Template Known Secondary structure																T	S						G	G	G					S																T	T								S			T					.						T										G	G	G
Template Predicted Secondary structure																																																															.
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.					.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure																																															.	.	.	.
Query SS confidence																																															.	.	.	.
Query Sequence		Y	G	F	I	G	G	I	D	A	H	C	F	E	E	S	Y	L	R	E	L	I	A	E	V	A	P	Q	R	A	K	E	A	R	P	F	R	L	A	V	I	Q	L	G	T	Y	.	.	.	.	D	G	T	I	Y	N	A	R	Q	V	V	D	K	I	G	H	L	C	D	Y	I	L	F	D	S	A	W	V	G	Y	E
Query Conservation																																															.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.																													.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																					.
Template Sequence		G	F	A	I	P	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	L	E	S	F	I	N	E	R	T	K	G	I	V	L	S	N	P	C	N	P	T	G	V	V	Y	G	K	D	E	X	R	Y	L	V	E	I	A	E	R	H	G	L	F	L	I	V	D	E	V	Y	S	.	E	I
Template Known Secondary structure		T	S				T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	G	G	G	G			T	T								S	S		T	T	T																			T	T								T	T	T	.	T
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																					.
Template SS confidence
		148	.	150	.	.	.																				.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.		.	.
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	F	I	P	M	M	A	D	C	S	P	L	L	L	D	L	N	E	N	D	P	G	I	L	V	T	Q	S	V	H	K	Q	Q	A	G	F	S	Q	T	S	Q	I	H	K	K	D	S	H	I	K	G	Q	Q	R	Y	V	P	H	K	R	M	N	N	A	F	M	M	H	A	S	T	S	P	F	Y	P	L	F	A	A
Query Conservation
Alig confidence						.	.														.	.	.	.																									.	.	.	.	.	.	.	.	.
Template Conservation						.	.														.	.	.	.																									.	.	.	.	.	.	.	.	.
Template Sequence		V	F	R	G	.	.	E	F	A	S	A	L	S	I	E	S	D	K	V	.	.	.	.	V	V	I	D	S	V	S	K	F	S	A	C	G	A	R	V	G	C	L	I	T	R	N	E	.	.	.	.	.	.	.	.	.	E	L	I	S	H	A	X	K	L	A	Q	G	R	L	A	P	P	L	L	E	Q	I	G	S
Template Known Secondary structure		B		S	S	.	.					G	G	G	S			T	T		.	.	.	.										S		G	G	G								S			.	.	.	.	.	.	.	.	.													S
Template Predicted Secondary structure						.	.														.	.	.	.																									.	.	.	.	.	.	.	.	.
Template SS confidence
		208	.	210	.			.	.	.	.	.	.	.	.	220	.	.	.	.					.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.										.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
		405	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	I	N	A	K	M	H	E	G	V	S	G	R	N	M	W	M	D	C	V	V	N	G	I	N	A	R	K	L	I	L	D	N	C	Q	H	I	R	P	F	V	P	E	L	V	D	G	K	P	W	Q	S	Y	E	T	A	Q	I	A	V	D	L	R	F	F	Q	F	V	P	G	E	H	W	H	S	F	E	G	Y
Query Conservation
Alig confidence						.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	G	L	L	.	.	.	.	.	.	N	L	D	D	S	F	F	D	F	V	R	E	T	Y	R	E	R	V	E	T	V	L	K	K	L	E	E	H	G	L	K	R	F	T	K	P	S	G	A	F	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure						.	.	.	.	.	.	T																											T	T				B				S	B	S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure						.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		274	.	.	.							.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		485	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.							.	.	.	.	530	.	.	.	.	.	.	.	.	.								540	.	.	.	.	.	.	.	.	.	550	.
Predicted Secondary structure																																											.	.	.	.	.	.															.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.															.	.	.	.	.	.	.
Query Sequence		A	E	N	Q	Y	F	V	D	P	C	K	L	L	L	T	T	P	G	I	D	A	R	N	G	E	Y	E	A	F	G	V	P	A	T	I	L	A	N	F	L	R	.	.	.	.	.	.	E	N	G	V	V	P	E	K	C	D	L	N	S	I	.	.	.	.	.	.	.	L	F	L	L	T	P	A	E	D	M	A	K
Query Conservation																																											.	.	.	.	.	.															.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.															.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	I	T	A	E	L	P	V	E	.	.	.	.	.	.	.	.	.	.	.	.	D	A	E	E	F	A	R	W	X	L	T	D	F	N	X	D	G	E	T	T	X	V	A	P	L	R	G	F	Y	L	T	P	G	L	G	K	K	E	I	R	I	A	C	V	L	E	K	D	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.						S	S	S	.	.	.	.	.	.	.	.	.	.	.	.												S			B	T	T								G	G	G	G		S	S	T	T	T	T	S	S								S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
													319	320	.	.	.	.	.	.													.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
		552	.	.	.	.	.	.	.	560	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	Q	L	V	A	L	L	V	R	F	E	K	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	S	R	A	I	D	V	L	X	E	G	L	K	X	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions