Job Description P24169 Confidence 99.59% Date Thu Jan 5 11:40:44 GMT 2012 Rank 182 Aligned Residues 301 % Identity 13% Template d1z7da1 SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.10

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		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	G	D	L	L	I	H	E	G	A	P	C	I	A	Q	Q	H	A	A	K	V	F	N	A	D	K	T	Y	F	V	L	N	G	T	S	S	S	N	K	V	V	L	N	A	L	L	T	P	G	D	L	V	L	F	D	R	N	N	H	K	S	N	H	H	G	A	L	L	Q	A	G	A	T	P	V	Y	L	E	T
Query Conservation
Alig confidence																																																												.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.
Template Sequence		T	I	C	S	R	A	F	F	S	V	P	L	G	I	C	E	R	Y	L	T	N	L	L	G	Y	D	K	V	L	M	M	N	T	G	A	E	A	N	E	T	A	Y	K	L	C	R	K	W	G	Y	E	V	K	K	I	P	E	N	.	.	.	.	.	.	M	A	K	I	V	V	C	K	N	N	Q	F	S	K	V	P
Template Known Secondary structure		S				T	T	S																	T		S						S	S																			T	S				T	T	.	.	.	.	.	.								T	T
Template Predicted Secondary structure																																																												.	.	.	.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.							.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.			.	.	.	.	.	.					300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.							.	.	.	.
Query SS confidence																																																			.	.							.	.	.	.
Query Sequence		A	R	N	P	Y	G	F	I	G	G	I	D	A	H	C	F	E	E	S	Y	L	R	E	L	I	A	E	V	A	P	Q	R	A	K	E	A	R	P	F	R	L	A	V	I	Q	L	G	T	Y	.	.	D	G	T	I	Y	N	.	.	.	.	A	R	Q	V	V	D	K	I	G	H	L	C	D	Y	I	L	F	D	S
Query Conservation																																																			.	.							.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.									.	.							.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	D	D	L	E	A	L	E	E	E	L	K	D	P	N	V	C	.	.	.	.	.	.	.	.	.	.	A	F	I	V	E	P	I	Q	G	E	A	G	V	I	V	P	S	D	N	Y	L	Q	G	V	Y	D	I	C	K	K	Y	N	V	L	F	V	A	D	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T										T	S	T	T			.	.	.	.	.	.	.	.	.	.						S	S	B	S	T	T	T	S	B				T	T												T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.
Template SS confidence
																178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.											.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	W	V	G	Y	E	Q	F	I	P	M	M	A	D	C	S	P	L	L	L	D	L	N	E	N	D	P	G	I	L	V	T	Q	S	V	H	K	Q	Q	A	G	F	S	Q	T	S	Q	I	H	K	K	D	S	H	I	K	G	Q	Q	R	Y	V	P	H	K	R	M	N	N	A	F	M	M	H	A	S	T	S	P	F
Query Conservation
Alig confidence														.	.	.											.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.											.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	Q	T	G	L	G	R	T	G	K	L	L	.	.	.	C	V	H	H	Y	N	V	K	P	D	.	.	.	.	V	I	L	L	G	K	A	L	S	G	G	H	Y	P	I	S	A	V	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	D	D	I	M	L	V	I	K	P	G	E	H	G	S	T	Y
Template Known Secondary structure		T	T	T	T	T	T	T	T	S	S	S	S	.	.	.	G	G	G	G	G	T				S	.	.	.	.						G	G	G	G	T	T	S	S								.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T			T	T					T	T
Template Predicted Secondary structure														.	.	.											.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.				.	.	.	.	250	.	.	.	.	.					.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.															.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	P	L	F	A	A	L	N	I	N	A	K	M	H	E	G	V	S	G	R	N	M	W	M	D	C	V	V	N	G	I	N	A	R	K	L	I	L	D	N	C	Q	H	I	R	P	F	V	P	E	L	V	D	G	K	P	W	Q	S	Y	E	T	A	Q	I	A	V	D	L	R	F	F	Q	F	V	P	G	E	H	W
Query Conservation
Alig confidence																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	G	N	P	L	A	A	S	I	C	V	E	A	L	N	V	L	I	N	E	K	L	C	E	N	A	E	K	L	G	G	P	F	L	E	N	L	K	R	E	L	K	D	S	K	I	V	R	D	V	R	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	T																		T	T																					T	T		T	T							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
		479	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	S	F	E	G	Y	A	E	N	Q	Y	F	V	D	P	C	K	L	L	L	T	T	P	G	I	D	A	R	N	G	E	Y	E	A	F	G	V	P	A	T	I	L	A	N	F	L	R	E	N	G	V	V	P	E	K	C	D	L	N	S	I	L	F	L	L	T	P	A	E	D	M	A	K	L	Q	Q	L	V	A	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	K	G	L	L	C	A	I	.	.	.	.	.	.	.	.	.	.	E	F	K	N	E	L	V	N	V	L	D	I	C	L	K	L	K	E	N	G	L	I	T	R	D	V	H	D	K	T	I	R	L	T	P	P	L	C	I	T	K	E	Q	L	D	E	C	T	E	I
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.		T	T					.	.	.	.	.	.	.	.	.	.				T	T	T													T	T							T	T	T								T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.
Template SS confidence
															345	.	.	.	.	350	.											.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
		559	560	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	R	F	E	K	L	L	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	V	K	T	V	K	F	F	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		402	.	.	.	.	.	.	.	410

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions