Job Description P24169 Confidence 99.68% Date Thu Jan 5 11:40:44 GMT 2012 Rank 142 Aligned Residues 303 % Identity 12% Template d1xi9a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases AAT-like Resolution 2.33

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		177	.	.	180	.	.	.	.	.	.	.	.								.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.
Query Sequence		C	I	A	Q	Q	H	A	A	K	V	F	N	.	.	.	.	.	.	.	A	D	K	T	Y	F	V	L	N	G	T	S	S	S	N	K	V	V	L	N	A	L	L	T	P	G	D	L	V	L	F	D	R	N	N	H	K	S	N	H	H	G	A	L	L	Q	A	G	A	T	P	V	Y	L	E	T	A	R	N	P	Y
Query Conservation														.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.																																										.
Template Conservation																																																														.
Template Sequence		P	E	L	R	K	A	I	V	E	R	E	K	R	K	N	G	V	D	I	T	P	D	D	V	R	V	T	A	A	V	T	E	A	L	Q	L	I	F	G	A	L	L	D	P	G	D	E	I	L	V	P	G	P	S	Y	P	P	Y	T	G	.	L	V	K	F	Y	G	G	K	P	V	E	Y	R	T	I	E	E	E	D
Template Known Secondary structure																						G	G	G					S																T	T								S								.					T	T										G	G	G	T
Template Predicted Secondary structure																																																														.
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.		.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.		.	.	.	.	.	.	.	.				300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure																																												.									.	.	.
Query SS confidence																																												.									.	.	.
Query Sequence		G	F	I	G	G	I	D	A	H	C	F	E	E	S	Y	L	R	E	L	I	A	E	V	A	P	Q	R	A	K	E	A	R	P	F	R	L	A	V	I	Q	L	G	.	T	Y	D	G	T	I	Y	N	.	.	.	A	R	Q	V	V	D	K	I	G	H	L	C	D	Y	I	L	F	D	S	A	W	V	G	Y	E	Q
Query Conservation																																												.									.	.	.
Alig confidence					.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.							.									.	.	.																							.
Template Conservation					.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.																																									.
Template Sequence		W	Q	P	.	.	.	.	.	.	.	.	D	I	D	D	I	R	K	K	I	T	D	R	T	K	A	.	.	.	.	.	.	.	.	.	.	I	A	V	I	N	P	N	N	P	T	G	A	L	Y	D	K	K	T	L	E	E	I	L	N	I	A	G	E	Y	E	I	P	V	I	S	D	E	I	Y	D	.	L	M	T
Template Known Secondary structure		S			.	.	.	.	.	.	.	.											T	T				.	.	.	.	.	.	.	.	.	.					S	S		T	T	T																				T								T	T	T	.	T		B
Template Predicted Secondary structure					.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.																																									.
Template SS confidence
		152	.	.									.	.	.	.	.	160	.	.	.	.	.	.	.	.	.											170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.		210	.	.
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.			.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
Predicted Secondary structure																																		.	.
Query SS confidence																																		.	.
Query Sequence		F	I	P	M	M	A	D	C	S	P	L	L	L	D	L	N	E	N	D	P	G	I	L	V	T	Q	S	V	H	K	Q	Q	.	.	A	G	F	S	Q	T	S	Q	I	H	K	K	D	S	H	I	K	G	Q	Q	R	Y	V	P	H	K	R	M	N	N	A	F	M	M	H	A	S	T	S	P	F	Y	P	L	F	A
Query Conservation																																		.	.
Alig confidence			.	.	.	.	.																											.	.																.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.																																												.	.	.	.	.	.	.
Template Sequence		Y	.	.	.	.	.	E	G	E	H	I	S	P	G	S	L	T	K	D	V	P	V	I	V	M	N	G	L	S	K	V	Y	F	A	T	G	W	R	L	G	Y	M	Y	F	V	D	P	E	N	.	.	.	.	.	.	.	K	L	S	E	V	R	E	A	I	D	R	L	A	R	I	R	L	C	P	N	T	P	A	Q
Template Known Secondary structure		S	.	.	.	.	.	S	S										S	S	S								S	T	T	T	T			G	G	G										T	T		.	.	.	.	.	.	.	T	T														T			S		S
Template Predicted Secondary structure			.	.	.	.	.																																												.	.	.	.	.	.	.
Template SS confidence
		213						.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.								.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
		404	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	N	I	N	A	K	M	H	E	G	V	S	G	R	N	M	W	M	D	C	V	V	N	G	I	N	A	R	K	L	I	L	D	N	C	Q	H	I	R	P	F	V	P	E	L	V	D	G	K	P	W	Q	S	Y	E	T	A	Q	I	A	V	D	L	R	F	F	Q	F	V	P	G	E	H	W	H	S	F	E	G
Query Conservation
Alig confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	A	A	I	A	G	L	T	G	P	M	D	Y	L	K	E	Y	M	K	K	L	K	E	R	R	D	Y	I	Y	K	R	L	N	E	I	P	G	I	S	T	T	K	P	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										S																									T	S	T	T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		484	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.							.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.
Query Sequence		Y	A	E	N	Q	Y	F	V	D	P	C	K	L	L	L	T	T	P	G	I	D	A	R	N	G	E	Y	E	A	F	G	V	P	A	T	I	L	A	N	F	L	R	E	N	G	V	V	P	E	.	.	.	.	.	.	K	C	D	L	N	S	I	L	F	L	L	T	P	A	E	D	M	A	K	L	Q	Q	L	V	A
Query Conservation																																																			.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.																					.	.	.	.	.	.										.	.
Template Conservation		.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.																																				.	.
Template Sequence		.	.	.	.	.	.	.	.	G	A	F	Y	I	F	P	K	I	E	V	G	P	.	.	.	.	.	.	.	.	W	K	N	D	K	E	F	V	L	D	V	L	H	N	A	H	V	L	F	V	H	G	S	G	F	G	E	Y	G	A	G	H	F	R	A	.	.	V	F	L	P	P	I	E	I	L	E	E	A	M	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	B	S	S								S		S	.	.	.	.	.	.	.	.		S	S																			G	G	G	G		G	G	G	T	T	B				.	.				S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.																																				.	.
Template SS confidence
										325	.	.	.	.	330	.	.	.	.	.	.	.									.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.			.	.	.	.	.	.	.	380	.	.	.	.	.	.
		558	.	560	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	V	R	F	E	K	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	F	E	K	F	M	K	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		387	.	.	390	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions