Job Description P24169 Confidence 99.69% Date Thu Jan 5 11:40:44 GMT 2012 Rank 138 Aligned Residues 314 % Identity 12% Template d1vp4a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases AAT-like Resolution 1.82

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		177	.	.	180	.	.	.	.	.	.	.	.	.	190					.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure																.	.	.	.
Query SS confidence																.	.	.	.
Query Sequence		C	I	A	Q	Q	H	A	A	K	V	F	N	A	D	.	.	.	.	K	T	Y	F	V	L	N	G	T	S	S	S	N	K	V	V	L	N	A	L	L	T	P	G	D	L	V	L	F	D	R	N	N	H	K	S	N	H	H	G	A	L	L	Q	A	G	A	T	P	V	Y	L	E	T	A	R	N	P	Y	G	F	I
Query Conservation																.	.	.	.
Alig confidence																.	.	.	.																																								.																.	.	.	.	.	.	.
Template Conservation																																																											.																.	.	.	.	.	.	.
Template Sequence		Q	Q	I	L	K	L	L	E	R	X	Y	G	I	T	G	L	D	E	D	N	L	I	F	T	V	G	S	Q	Q	A	L	D	L	I	G	K	L	F	L	D	D	E	S	Y	C	V	L	D	D	P	A	Y	L	G	A	I	N	.	A	F	R	Q	Y	L	A	N	F	V	V	V	P	L	E	.	.	.	.	.	.	.
Template Known Secondary structure																S			G	G	G																					T	T								S								.				T	T	T										.	.	.	.	.	.	.
Template Predicted Secondary structure																																																											.																.	.	.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.		.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.		.	.	.	.	.	.	.	.				300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure																																									.									.	.	.
Query SS confidence																																									.									.	.	.
Query Sequence		G	G	I	D	A	H	C	F	E	E	S	Y	L	R	E	L	I	A	E	V	A	P	Q	R	A	K	E	A	R	P	F	R	L	A	V	I	Q	L	G	.	T	Y	D	G	T	I	Y	N	.	.	.	A	R	Q	V	V	D	K	I	G	H	L	C	D	Y	I	L	F	D	S	A	W	V	G	Y	E	Q	F	I	P
Query Conservation																																									.									.	.	.
Alig confidence		.	.	.	.																	.																			.									.	.	.																							.					.	.
Template Conservation		.	.	.	.																	.																																																					.					.	.
Template Sequence		.	.	.	.	D	D	G	X	D	L	N	V	L	E	R	K	L	S	E	F	.	D	K	N	G	K	I	K	Q	V	K	F	I	Y	V	V	S	N	F	H	N	P	A	G	V	T	T	S	L	E	K	R	K	A	L	V	E	I	A	E	K	Y	D	L	F	I	V	E	D	D	P	Y	G	.	A	L	R	Y	.	.
Template Known Secondary structure		.	.	.	.	T	T															.			T	T		G	G	G									S	S		T	T	T																			T	T								S	S	T	.	T		B		.	.
Template Predicted Secondary structure		.	.	.	.																	.																																																					.					.	.
Template SS confidence
						152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.		.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.		220	.	.	.
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	M	A	D	C	S	P	L	L	L	D	L	N	E	N	D	P	G	I	L	V	T	Q	S	V	H	K	Q	Q	A	G	F	S	Q	T	S	Q	I	H	K	K	D	S	H	I	K	G	Q	Q	R	Y	V	P	H	K	R	M	N	N	A	F	M	M	H	A	S	T	S	P	F	Y	P	L	F	A	A	L	N	I	N
Query Conservation
Alig confidence		.	.																																										.	.	.	.	.	.	.	.	.
Template Conservation		.	.																																										.	.	.	.	.	.	.	.	.
Template Sequence		.	.	E	G	E	T	V	D	P	I	F	K	I	G	G	P	E	R	V	V	L	L	N	T	F	S	K	V	L	A	P	G	L	R	I	G	X	V	A	G	S	K	E	.	.	.	.	.	.	.	.	.	F	I	R	K	I	V	Q	A	K	Q	S	A	D	L	C	S	P	A	I	T	H	R	L	A	A	R	Y	L
Template Known Secondary structure		.	.	S	S												T	T	T							S	T	T	T	T		G	G	G											.	.	.	.	.	.	.	.	.														S	S
Template Predicted Secondary structure		.	.																																										.	.	.	.	.	.	.	.	.
Template SS confidence
				224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.										.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
		409	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	M	H	E	G	V	S	G	R	N	M	W	M	D	C	V	V	N	G	I	N	A	R	K	L	I	L	D	N	C	Q	H	I	R	P	F	V	P	E	L	V	D	G	K	P	W	Q	S	Y	E	T	A	Q	I	A	V	D	L	R	F	F	Q	F	V	P	G	E	H	W	H	S	F	E	G	Y	A	E	N	Q
Query Conservation
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	R	Y	D	L	L	E	Q	L	K	P	T	I	E	L	Y	R	R	K	R	T	V	X	L	N	A	L	E	E	Y	F	S	D	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	G	V
Template Known Secondary structure				S						T																						S	T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.																																												.	.	.
		489	490	.	.	.				.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.									.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.																																								.	.	.	.	.	.	.	.
Query SS confidence							.	.	.																																								.	.	.	.	.	.	.	.
Query Sequence		Y	F	V	D	P	.	.	.	C	K	L	L	L	T	T	P	G	I	D	A	R	N	G	E	Y	E	A	F	G	V	P	A	T	I	L	A	N	F	L	R	E	N	G	V	V	P	E	.	.	.	.	.	.	.	.	K	C	D	L	N	S	I	L	F	L	L	T	P	A	E	D	M	A	K	L	Q	Q	L	V	A
Query Conservation							.	.	.																																								.	.	.	.	.	.	.	.
Alig confidence							.	.	.										.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.													.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.																																								.
Template Sequence		K	W	V	K	S	E	G	G	L	F	I	W	L	T	L	P	E	.	.	.	.	.	.	.	.	.	.	.	G	F	D	T	W	E	X	F	E	Y	A	K	R	K	K	V	F	Y	V	P	G	R	V	F	K	V	Y	D	E	P	S	P	S	X	R	L	S	F	C	.	L	P	P	D	E	K	I	V	E	G	I	K
Template Known Secondary structure							S	B	S	S								T	.	.	.	.	.	.	.	.	.	.	.	T			T	T	T	T								T						G	G	G	G		T	T					S							S	.	S	S
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.																																								.
Template SS confidence
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.												.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.		.	.	.	.	390	.	.	.	.	.	.	.
		558	.	560	.	.	.	.	.	.	.	.	.	570	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	V	R	F	E	K	L	L	E	S	D	A	P	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	L	R	E	V	V	L	E	Y	G	K	E	K	H	L
Template Known Secondary structure														T	T
Template Predicted Secondary structure
Template SS confidence
		398	.	400	.	.	.	.	.	.	.	.	.	410	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions