Job Description P24169 Confidence 99.84% Date Thu Jan 5 11:40:44 GMT 2012 Rank 65 Aligned Residues 304 % Identity 12% Template d1v72a1 SCOP info PLP-dependent transferase-like PLP-dependent transferases AAT-like Resolution 2.05

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		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.					.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure																																																															.	.	.	.
Query SS confidence																																																															.	.	.	.
Query Sequence		D	L	L	I	H	E	G	A	P	C	I	A	Q	Q	H	A	A	K	V	F	N	A	D	K	T	Y	F	V	L	N	G	T	S	S	S	N	K	V	V	L	N	A	L	L	T	P	G	D	L	V	L	F	D	R	N	N	H	K	S	N	H	.	.	.	.	H	G	A	L	L	Q	A	G	A	T	P	V	Y	L	E
Query Conservation																																																															.	.	.	.
Alig confidence																																																															.	.	.	.		.
Template Conservation																																																																				.
Template Sequence		G	P	Y	G	T	D	E	L	T	A	Q	V	K	R	K	F	C	E	I	F	E	R	D	V	E	V	F	L	V	P	T	G	T	A	A	N	A	L	C	L	S	A	M	T	P	P	W	G	N	I	Y	C	H	P	A	S	H	I	N	N	D	E	C	G	A	P	.	E	F	F	S	N	G	A	K	L	M	T	V	D
Template Known Secondary structure			S	T	T		S															T	S								S												T	S			T	T							T	T	S					S	S	T	T			.				T	T	S
Template Predicted Secondary structure																																																																				.
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.				.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure																																																									.	.	.
Query SS confidence																																																									.	.	.
Query Sequence		T	A	R	N	P	Y	G	F	I	G	G	I	D	A	H	C	F	E	E	S	Y	L	R	E	L	I	A	E	V	A	P	Q	R	A	K	E	A	R	P	F	R	L	A	V	I	Q	L	G	T	Y	D	G	T	I	Y	.	.	.	N	A	R	Q	V	V	D	K	I	G	H	L	C	D	Y	I	L	F	D	S	A	W
Query Conservation																																																									.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.																	.	.																									.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.																	.	.
Template Sequence		G	P	.	.	.	.	.	.	.	.	.	.	.	A	A	K	L	D	I	V	R	L	R	E	R	T	R	E	K	.	.	V	G	D	V	H	T	T	Q	P	A	C	V	S	I	T	Q	A	T	E	V	G	S	I	Y	T	L	D	E	I	E	A	I	G	D	V	C	K	S	S	S	L	G	L	H	M	D	G	S	R
Template Known Secondary structure			G	.	.	.	.	.	.	.	.	.	.	.	G	G											T	T	S	S	.	.	T	T		T	T	S										S	S		T	T	S																		T	T								T	T
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.																	.	.
Template SS confidence
		116	.												.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.			.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	Y	E	Q	F	I	P	M	M	A	D	C	S	P	L	L	L	D	L	N	E	N	D	P	G	I	L	V	T	Q	S	V	H	K	Q	Q	A	G	F	S	Q	T	S	Q	I	H	K	K	D	S	H	I	K	G	Q	Q	R	Y	V	P	H	K	R	M	N	N	A	F	M	M	H	A	S	T	S	P	F	Y	P
Query Conservation
Alig confidence												.													.	.	.	.																									.	.	.	.	.	.	.	.	.	.
Template Conservation												.													.	.	.	.																									.	.	.	.	.	.	.	.	.	.
Template Sequence		F	A	N	A	L	V	S	L	G	C	.	S	P	A	E	M	T	W	K	A	G	V	D	.	.	.	.	A	L	S	F	G	A	T	K	N	G	V	L	A	A	E	A	I	V	L	F	N	T	S	L	.	.	.	.	.	.	.	.	.	.	A	T	E	M	S	Y	R	R	K	R	A	G	H	L	S	S	K	M	R
Template Known Secondary structure										T		.		T	T	T	T	T	G	G	G	T			.	.	.	.							G	G	G	T		S	S							S	S	G	G	G	.	.	.	.	.	.	.	.	.	.											T	T				S	S	T
Template Predicted Secondary structure												.													.	.	.	.																									.	.	.	.	.	.	.	.	.	.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.					.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.											.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	A	A	L	N	I	N	A	K	M	H	E	G	V	S	G	R	N	M	W	M	D	C	V	V	N	G	I	N	A	R	K	L	I	L	D	N	C	Q	H	I	R	P	F	V	P	E	L	V	D	G	K	P	W	Q	S	Y	E	T	A	Q	I	A	V	D	L	R	F	F	Q	F	V	P	G	E	H	W	H	S
Query Conservation
Alig confidence							.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	L	S	A	Q	.	.	I	D	A	Y	L	T	D	D	L	W	L	R	N	A	R	K	A	N	A	A	A	Q	R	L	A	Q	G	L	E	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							.	.					T	S	T	T																					T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure							.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		248	.	250	.	.			.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
		481	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.		.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																.
Query SS confidence																																																.
Query Sequence		F	E	G	Y	A	E	N	Q	Y	F	V	D	P	C	K	L	L	L	T	T	P	G	I	D	A	R	N	G	E	Y	E	A	F	G	V	P	A	T	I	L	A	N	F	L	R	E	.	N	G	V	V	P	E	K	C	D	L	N	S	I	L	F	L	L	T	P	A	E	D	M	A	K	L	Q	Q	L	V	A	L	L
Query Conservation																																																.
Alig confidence		.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.															.
Template Conservation		.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	G	G	V	E	V	L	G	G	T	E	A	N	I	L	F	.	.	.	.	.	.	.	.	.	.	.	.	C	R	L	D	S	A	M	I	D	A	L	L	K	A	G	F	G	F	Y	H	D	R	W	G	P	N	V	V	R	F	V	T	S	F	A	T	T	A	E	D	V	D	H	L	L	N	Q	V
Template Known Secondary structure		.	.	.	.	.	T	T					S				S	S				.	.	.	.	.	.	.	.	.	.	.	.														T	T		B		B		S	S	S	S	T	T								T	T
Template Predicted Secondary structure		.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
							284	.	.	.	.	.	290	.	.	.	.	.	.	.	.													.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
		560	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		347	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions