Job Description P24169 Confidence 99.75% Date Thu Jan 5 11:40:44 GMT 2012 Rank 109 Aligned Residues 304 % Identity 14% Template d1v2da_ SCOP info PLP-dependent transferase-like PLP-dependent transferases AAT-like Resolution 1.90

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		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		D	V	A	M	G	D	L	L	I	H	E	G	A	P	C	I	A	Q	Q	H	A	A	K	V	F	N	A	D	.	K	T	Y	F	V	L	N	G	T	S	S	S	N	K	V	V	L	N	A	L	L	T	P	G	D	L	V	L	F	D	R	N	N	H	K	S	N	H	H	G	A	L	L	Q	A	G	A	T	P	V	Y
Query Conservation																														.
Alig confidence															.															.																																								.
Template Conservation															.																																																							.
Template Sequence		L	G	R	Q	D	Q	Y	A	P	P	A	G	L	.	P	A	L	R	E	A	L	A	E	E	F	A	V	E	P	E	S	V	V	V	T	S	G	A	T	E	A	L	Y	V	L	L	Q	S	L	V	G	P	G	D	E	V	V	V	L	E	P	F	F	D	V	Y	L	P	.	D	A	F	L	A	G	A	K	A	R	L
Template Known Secondary structure		T	T	T	S		S				T	T			.												T	S		G	G	G					S	S															T	T								S			T	T				.					T	T
Template Predicted Secondary structure															.																																																							.
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.		.	.	120	.	.	.	.	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.					.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.
Query SS confidence																																																						.	.	.	.
Query Sequence		L	E	T	A	R	N	P	Y	G	F	I	G	G	I	D	A	H	C	F	E	E	S	Y	L	R	E	L	I	A	E	V	A	P	Q	R	A	K	E	A	R	P	F	R	L	A	V	I	Q	L	G	T	Y	.	.	.	.	D	G	T	I	Y	N	A	R	Q	V	V	D	K	I	G	H	L	C	D	Y	I	L	F	D
Query Conservation																																																						.	.	.	.
Alig confidence												.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Template Conservation												.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.
Template Sequence		V	R	L	D	L	T	P	E	G	F	.	.	.	.	.	.	.	R	L	D	L	S	A	L	E	.	.	.	.	.	.	.	.	.	.	K	A	L	T	P	R	T	R	A	L	L	L	N	T	P	M	N	P	T	G	L	V	F	G	E	R	E	L	E	A	I	A	R	L	A	R	A	H	D	L	F	L	I	S	D
Template Known Secondary structure								T	T			.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	T	T			T	T								S	S		T	T	T																			T	T
Template Predicted Secondary structure												.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.
Template SS confidence
		129	130	.	.	.	.	.	.	.	.								.	140	.	.	.	.	.	.											.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	W	V	G	Y	E	Q	F	I	P	M	M	A	D	C	S	P	L	L	L	D	L	N	E	N	D	P	G	I	L	V	T	Q	S	V	H	K	Q	Q	A	G	F	S	Q	T	S	Q	I	H	K	K	D	S	H	I	K	G	Q	Q	R	Y	V	P	H	K	R	M	N	N	A	F	M	M	H	A	S	T	S	P
Query Conservation
Alig confidence						.	.	.																				.	.	.	.																										.	.	.	.	.	.	.	.
Template Conservation						.	.	.																				.	.	.	.																										.	.	.	.	.	.	.	.
Template Sequence		E	V	Y	D	.	.	.	E	L	Y	Y	G	E	R	P	R	R	L	R	E	F	A	P	E	R	T	.	.	.	.	F	T	V	G	S	A	G	K	R	L	E	A	T	G	Y	R	V	G	W	I	V	G	P	K	E	.	.	.	.	.	.	.	.	F	M	P	R	L	A	G	M	R	Q	W	T	S	F	S	A	P
Template Known Secondary structure			T	T	T	.	.	.	T		B	S	S	S										T	T	T		.	.	.	.										T	T		G	G	G									T	T	.	.	.	.	.	.	.	.	T												T	S	S
Template Predicted Secondary structure						.	.	.																				.	.	.	.																										.	.	.	.	.	.	.	.
Template SS confidence
		192	.	.	.				.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.					.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.									240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
		398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	Y	P	L	F	A	A	L	N	I	N	A	K	M	H	E	G	V	S	G	R	N	M	W	M	D	C	V	V	N	G	I	N	A	R	K	L	I	L	D	N	C	Q	H	I	R	P	F	V	P	E	L	V	D	G	K	P	W	Q	S	Y	E	T	A	Q	I	A	V	D	L	R	F	F	Q	F	V	P	G	E	H
Query Conservation
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	P	L	Q	A	G	V	A	E	A	L	K	L	A	R	R	E	G	F	Y	E	A	L	R	E	G	Y	R	R	R	R	D	L	L	A	G	G	L	R	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																		T	T																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
		478	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.									.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.
Query Sequence		W	H	S	F	E	G	Y	A	E	N	Q	Y	F	V	D	P	C	K	L	L	L	T	T	P	G	I	D	A	R	N	G	E	Y	E	A	F	G	V	P	A	T	I	L	A	N	F	L	R	E	N	G	V	V	P	.	.	.	.	.	.	.	.	E	K	C	D	L	N	S	I	L	F	L	L	T	P	A	E	D	M
Query Conservation																																																								.	.	.	.	.	.	.	.
Alig confidence		.														.	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.											.	.
Template Conservation		.														.	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.
Template Sequence		.	M	G	L	R	V	Y	V	P	E	G	T	Y	F	.	.	.	.	L	M	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	L	P	G	W	D	A	F	R	L	V	E	E	A	R	V	A	L	I	P	A	S	A	F	Y	L	E	D	P	P	K	D	L	F	R	F	.	.	A	F	C	K	T	E
Template Known Secondary structure		.	T	T							S	B	S	S		.	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T										T							G	G	G	G		S	S	S			T	T					.	.				S
Template Predicted Secondary structure		.														.	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.
Template SS confidence
			297	.	.	300	.	.	.	.	.	.	.	.	.					310	.	.																.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.			.	350	.	.	.	.
		550	.	.	.	.	.	.	.	.	.	560	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	L	Q	Q	L	V	A	L	L	V	R	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	E	L	H	L	A	L	E	R	L	G	R	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		355	.	.	.	.	360	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions