Job Description P24169 Confidence 99.72% Date Thu Jan 5 11:40:44 GMT 2012 Rank 127 Aligned Residues 301 % Identity 15% Template d1s0aa_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 1.71

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		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.			.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210								.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.																								.	.	.	.	.	.	.																														.	.	.
Query SS confidence																		.	.																								.	.	.	.	.	.	.																														.	.	.
Query Sequence		H	E	G	A	P	C	I	A	Q	Q	H	A	A	K	V	F	.	.	N	A	D	K	T	Y	F	V	L	N	G	T	S	S	S	N	K	V	V	L	N	A	L	.	.	.	.	.	.	.	L	T	P	G	D	L	V	L	F	D	R	N	N	H	K	S	N	H	H	G	A	L	L	Q	A	G	A	T	P	.	.	.
Query Conservation																		.	.																								.	.	.	.	.	.	.																														.	.	.
Alig confidence																		.	.																								.	.	.	.	.	.	.																				.										.	.	.
Template Conservation																																																																					.
Template Sequence		T	H	A	P	A	I	E	L	C	R	K	L	V	A	M	T	P	Q	P	L	E	C	V	F	L	A	D	S	G	S	V	A	V	E	V	A	M	K	M	A	L	Q	Y	W	Q	A	K	G	E	A	R	Q	R	F	L	T	F	R	N	G	Y	H	G	D	T	F	G	.	A	M	S	V	C	D	P	D	N	S	M	H
Template Known Secondary structure																	S		T	T								S	S																				T										T	T					S	S			.			T	T	S		T	T	T	T	T	G
Template Predicted Secondary structure																																																																					.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150		.	.	.	.	.	.	.	.	.	160	.	.
											240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.								.	.	300	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.																																																											.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.																																																											.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	V	Y	L	E	T	A	R	N	P	Y	G	F	I	G	G	I	D	A	H	C	F	E	E	S	Y	L	R	E	L	I	A	E	V	A	P	Q	R	A	K	E	A	R	P	F	R	L	A	V	I	Q	L	G	T	Y	D	G	T	I	.	.	.	.	.	.	.	Y	N	A	R	Q	V
Query Conservation		.	.	.	.	.	.	.	.	.																																																											.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.														.	.	.	.																						.	.	.	.	.	.	.	.													.	.	.	.	.	.	.
Template Conservation																								.	.	.	.																						.	.	.	.	.	.	.	.
Template Sequence		S	L	W	K	G	Y	L	P	E	N	L	F	A	P	A	P	Q	S	R	M	G	E	.	.	.	.	W	D	E	R	D	M	V	G	F	A	R	L	M	A	A	H	R	H	E	I	A	.	.	.	.	.	.	.	.	A	V	I	I	E	P	I	V	Q	G	A	G	G	M	R	M	Y	H	P	E	W	L	K	R	I
Template Known Secondary structure		G	G	G	T	T	T	S											S	B				.	.	.	.			G	G	G	G											T	T	T			.	.	.	.	.	.	.	.						S	S				T	T	T				B		T
Template Predicted Secondary structure																								.	.	.	.																						.	.	.	.	.	.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.					.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.									.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	K	I	G	H	L	C	D	Y	I	L	F	D	S	A	W	V	G	Y	E	Q	F	I	P	M	M	A	D	C	S	P	L	L	L	D	L	N	E	N	D	P	G	I	L	V	T	Q	S	V	H	K	Q	Q	A	G	F	S	Q	T	S	Q	I	H	K	K	D	S	H	I	K	G	Q	Q	R	Y	V	P	H	K
Query Conservation
Alig confidence																													.	.	.											.	.	.	.										.											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.											.	.	.	.										.											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	K	I	C	D	R	E	G	I	L	L	I	A	D	E	I	A	T	G	F	G	R	T	G	K	L	F	.	.	.	A	C	E	H	A	E	I	A	P	D	.	.	.	.	I	L	C	L	G	A	L	T	G	.	G	T	M	T	L	S	A	T	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	T	R	E
Template Known Secondary structure									T								T	T	T	T	T	T	T	T	S	S	S	S	.	.	.	G	G	G	G	G	T				S	.	.	.	.							T	T	S	.	S	S	S								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																													.	.	.											.	.	.	.										.											.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.				.	260	.	.	.	.	.	.	.	.					.	270	.	.	.	.	.	.	.		.	.	280	.	.	.	.	.	.	.														.	.	290
		384	.	.	.	.	.	390	.							.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.
Query Sequence		R	M	N	N	A	F	M	M	.	.	.	.	.	.	H	A	S	T	S	P	F	Y	P	L	F	A	A	L	N	I	N	A	K	M	H	E	G	V	S	G	R	N	M	W	M	D	C	V	V	N	G	I	N	A	R	K	L	I	L	D	N	C	Q	H	I	R	P	F	V	P	E	L	V	D	G	K	P	W	Q	S
Query Conservation										.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.											.	.																																															.	.	.	.	.	.	.	.
Template Conservation																										.	.																																															.	.	.	.	.	.	.	.
Template Sequence		V	A	E	T	I	S	N	G	E	A	G	C	F	M	H	G	P	T	F	M	G	N	P	L	.	.	A	C	A	A	A	N	A	S	L	A	I	L	E	S	G	D	W	Q	Q	Q	V	A	D	I	E	V	Q	L	R	E	Q	L	A	P	A	R	D	A	E	M	V	A	D	V	R	V	.	.	.	.	.	.	.	.
Template Known Secondary structure								T	S	T	T	S	S		S				T	T	T	T				.	.														T																			G	G	G	G	G		T	T							.	.	.	.	.	.	.	.
Template Predicted Secondary structure																										.	.																																															.	.	.	.	.	.	.	.
Template SS confidence
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.			.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
		458	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	E	T	A	Q	I	A	V	D	L	R	F	F	Q	F	V	P	G	E	H	W	H	S	F	E	G	Y	A	E	N	Q	Y	F	V	D	P	C	K	L	L	L	T	T	P	G	I	D	A	R	N	G	E	Y	E	A	F	G	V	P	A	T	I	L	A	N	F	L	R	E	N	G	V	V	P	E	K	C	D	L	N
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.																			.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.																			.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	A	I	G	V	V	E	T	T	H	.	.	.	.	.	.	.	.	.	.	.	P	V	N	M	A	A	L	Q	K	F	F	V	E	Q	G	V	W	I	.	R	P	F	G	K
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T							S	S	.	.	.	.	.	.	.	.	.	.	.		B												T	T				.			B	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.																			.
Template SS confidence
																																				362	.	.	.	.	.	.	.	370	.	.												.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390		.	.	.	.	.
		538	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	L	F	L	L	T	P	A	E	D	M	A	K	L	Q	Q	L	V	A	L	L	V	R	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	I	Y	L	M	P	P	Y	I	I	L	P	Q	Q	L	Q	R	L	T	A	A	V	N	R	A
Template Known Secondary structure									T	T
Template Predicted Secondary structure
Template SS confidence
		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions