Job Description P24169 Confidence 99.64% Date Thu Jan 5 11:40:44 GMT 2012 Rank 166 Aligned Residues 289 % Identity 20% Template d1o4sa_ SCOP info PLP-dependent transferase-like PLP-dependent transferases AAT-like Resolution 1.90

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		177	.	.	180	.	.	.	.	.	.	.	.								.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.
Query Sequence		C	I	A	Q	Q	H	A	A	K	V	F	N	.	.	.	.	.	.	.	A	D	K	T	Y	F	V	L	N	G	T	S	S	S	N	K	V	V	L	N	A	L	L	T	P	G	D	L	V	L	F	D	R	N	N	H	K	S	N	H	H	G	A	L	L	Q	A	G	A	T	P	V	Y	L	E	T	A	R	N	P	Y
Query Conservation														.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.																																										.
Template Conservation																																																														.
Template Sequence		Y	E	L	R	E	G	I	A	K	R	I	G	E	R	Y	K	K	D	I	S	P	D	Q	V	V	V	T	N	G	A	K	Q	A	L	F	N	A	F	M	A	L	L	D	P	G	D	E	V	I	V	F	S	P	V	W	V	S	Y	I	P	.	Q	I	I	L	A	G	G	T	V	N	V	V	E	T	F	M	S	K	N
Template Known Secondary structure																	T					G	G	G					S																T	T								S			T	T				.					T	T										G	G	G	T
Template Predicted Secondary structure																																																														.
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.				300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.
Query SS confidence																																																				.	.	.
Query Sequence		G	F	I	G	G	I	D	A	H	C	F	E	E	S	Y	L	R	E	L	I	A	E	V	A	P	Q	R	A	K	E	A	R	P	F	R	L	A	V	I	Q	L	G	T	Y	D	G	T	I	Y	N	.	.	.	A	R	Q	V	V	D	K	I	G	H	L	C	D	Y	I	L	F	D	S	A	W	V	G	Y	E	Q	F
Query Conservation																																																				.	.	.
Alig confidence					.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.															.	.	.																						.
Template Conservation					.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.																																							.
Template Sequence		F	Q	P	.	.	.	.	.	.	.	.	S	L	E	E	V	E	G	L	L	V	G	K	T	K	A	V	.	.	.	.	.	.	.	.	.	L	I	N	S	P	N	N	P	T	G	V	V	Y	R	R	E	F	L	E	G	L	V	R	L	A	K	K	R	N	F	Y	I	I	S	D	E	V	Y	.	D	S	L	V	Y
Template Known Secondary structure		T			.	.	.	.	.	.	.	.								T			T	T					.	.	.	.	.	.	.	.	.				S	S		T	T	T																				T								T	T	.	T	T	S	B
Template Predicted Secondary structure					.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.																																							.
Template SS confidence
		148	.	150									.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.										.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.			.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
Predicted Secondary structure																																.	.
Query SS confidence																																.	.
Query Sequence		I	P	M	M	A	D	C	S	P	L	L	L	D	L	N	E	N	D	P	G	I	L	V	T	Q	S	V	H	K	Q	.	.	Q	A	G	F	S	Q	T	S	Q	I	H	K	K	D	S	H	I	K	G	Q	Q	R	Y	V	P	H	K	R	M	N	N	A	F	M	M	H	A	S	T	S	P	F	Y	P	L	F	A	A
Query Conservation																																.	.
Alig confidence		.	.	.	.																											.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	T	D	E	F	T	S	I	L	D	V	S	E	G	F	D	R	I	V	Y	I	N	G	F	S	K	S	H	S	M	T	G	W	R	V	G	Y	L	I	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	E	K	V	A	T	A	V	S	K	I	Q	S	H	T	T	S	C	I	N	T	V	A
Template Known Secondary structure		.	.	.	.	S	S										S	S	S	T	T							S	T	T	T	T	T		G	G	G								.	.	.	.	.	.	.	.	.	.	.	.	.	.																T		S
Template Predicted Secondary structure		.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
						210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.															.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
		405	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	I	N	A	K	M	H	E	G	V	S	G	R	N	M	W	M	D	C	V	V	N	G	I	N	A	R	K	L	I	L	D	N	C	Q	H	I	R	P	F	V	P	E	L	V	D	G	K	P	W	Q	S	Y	E	T	A	Q	I	A	V	D	L	R	F	F	Q	F	V	P	G	E	H	W	H	S	F	E	G	Y
Query Conservation
Alig confidence													.																							.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.																							.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	Y	A	A	L	K	A	L	E	V	D	.	N	S	Y	M	V	Q	T	F	K	E	R	K	N	F	V	V	E	R	L	K	K	M	.	.	G	V	K	F	V	E	P	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									T	T			.																						T	.	.	T							S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure													.																							.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.		.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.			.	.	.	.	.	310	.	.
		485	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.					.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Predicted Secondary structure																																																	.	.	.	.
Query SS confidence																																																	.	.	.	.
Query Sequence		A	E	N	Q	Y	F	V	D	P	C	K	L	L	L	T	T	P	G	I	D	A	R	N	G	E	Y	E	A	F	G	V	P	A	T	I	L	A	N	F	L	R	E	N	G	V	V	P	.	.	.	.	E	K	C	D	L	N	S	I	L	F	L	L	T	P	A	E	D	M	A	K	L	Q	Q	L	V	A	L	L	V
Query Conservation																																																	.	.	.	.
Alig confidence		.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.											.	.
Template Conservation		.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.																																	.	.
Template Sequence		.	.	.	.	.	.	.	G	A	F	Y	L	F	F	K	V	R	.	.	.	.	.	.	.	.	.	.	.	.	G	D	D	V	K	F	C	E	R	L	L	E	E	K	K	V	A	L	V	P	G	S	A	F	L	K	P	G	F	V	R	L	.	.	S	F	A	T	S	I	E	R	L	T	E	A	L	D	R	I	E
Template Known Secondary structure		.	.	.	.	.	.	.	B	S	S							S	.	.	.	.	.	.	.	.	.	.	.	.	S																				G	G	G	G	T		T	T					.	.				S
Template Predicted Secondary structure		.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.																																	.	.
Template SS confidence
									313	.	.	.	.	.	.	320	.	.													.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.			.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
		561	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		372	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions