Job Description P24169 Confidence 99.89% Date Thu Jan 5 11:40:44 GMT 2012 Rank 37 Aligned Residues 297 % Identity 12% Template d1mdoa_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 1.70

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		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	C	I	A	Q	Q	H	A	A	K	V	F	N	A	D	K	T	Y	F	V	L	N	G	T	S	S	S	N	K	V	V	L	N	A	L	L	T	P	G	D	L	V	L	F	D	R	N	N	H	K	S	N	H	H	G	A	L	L	Q	A	G	A	T	P	V	Y	L	E	T	A	R	N	P	Y	G	F	I	G	G	I
Query Conservation
Alig confidence																																																								.																		.	.	.	.	.	.	.	.
Template Conservation																																																								.																		.	.	.	.	.	.	.	.
Template Sequence		N	Q	E	L	E	A	A	F	C	R	L	T	G	N	Q	Y	A	V	A	V	S	S	A	T	A	G	X	H	I	A	L	X	A	L	G	I	G	E	G	D	E	V	I	T	P	S	X	T	W	V	S	T	L	N	.	X	I	V	L	L	G	A	N	P	V	X	V	D	V	D	R	D	.	.	.	.	.	.	.	.
Template Known Secondary structure																S						S													T	T			T	T							S	S	S							.					T	T								B		T	T	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																								.																		.	.	.	.	.	.	.	.
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.		.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	H	C	F	E	E	S	Y	L	R	E	L	I	A	E	V	A	P	Q	R	A	K	E	A	R	P	F	R	L	A	V	I	Q	L	G	T	Y	D	G	T	I	Y	N	A	R	Q	V	V	D	K	I	G	H	L	C	D	Y	I	L	F	D	S	A	W	V	G	Y	E	Q	F	I	P	M	M	A	D	C	S	P
Query Conservation
Alig confidence		.																		.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.
Template Conservation		.																		.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.
Template Sequence		.	T	L	X	V	T	P	E	H	I	E	A	A	I	T	P	Q	T	.	.	.	.	.	.	.	.	.	.	.	.	K	A	I	I	P	V	H	Y	A	G	A	P	A	D	L	D	A	I	Y	A	L	G	E	R	Y	G	I	P	V	I	E	D	A	A	H	A	T	G	T	S	Y	K	.	.	.	.	.	.	G	R
Template Known Secondary structure		.	T			B											T	T		.	.	.	.	.	.	.	.	.	.	.	.						B		G	G	G																T			B					T	T		T	T				T	.	.	.	.	.	.	T
Template Predicted Secondary structure		.																		.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.
Template SS confidence
			112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.													.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170							.	.
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.											.	.	.	.	.	.	400	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.	.	.	.	.
Query Sequence		L	L	L	D	L	N	E	N	D	P	G	I	L	V	T	Q	S	V	H	K	Q	Q	A	G	F	S	Q	T	S	Q	I	H	K	K	D	S	H	I	K	G	Q	Q	R	Y	V	P	H	K	R	M	N	N	A	F	M	M	H	A	.	.	.	.	.	.	.	.	.	.	S	T	S	P	F	Y	P	L	F	A	A	L
Query Conservation																																																												.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	I	G	A	R	G	T	A	.	.	.	.	I	F	S	F	H	A	I	K	N	I	T	C	A	E	G	G	I	V	V	T	.	.	.	.	.	.	.	.	.	.	.	.	D	N	P	Q	F	A	D	K	L	R	S	L	K	F	H	G	L	G	V	D	Q	A	E	V	L	A	P	G	Y	K	Y	N	L	P	D	L
Template Known Secondary structure			T	T	S	S	S			.	.	.	.						T	T	S	S	S		S	S	S							.	.	.	.	.	.	.	.	.	.	.	.	S												T	B	T	T									S	S				B
Template Predicted Secondary structure										.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		173	.	.	.	.	.	.	180					.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200													.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		406	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	I	N	A	K	M	H	E	G	V	S	G	R	N	M	W	M	D	C	V	V	N	G	I	N	A	R	K	L	I	L	D	N	C	Q	H	I	R	P	F	V	P	E	L	V	D	G	K	P	W	Q	S	Y	E	T	A	Q	I	A	V	D	L	R	F	F	Q	F	V	P	G	E	H	W	H	S	F	E	G	Y	A
Query Conservation
Alig confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	A	A	I	A	L	A	Q	L	Q	K	L	D	A	L	N	A	R	R	A	A	I	A	A	Q	Y	H	Q	A	X	A	D	L	P	F	Q	P	L	S	L	P	S	W	E	H	I	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure												T																					T	S	S								S	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
		486	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.																										.	.	.	.	.	.	.	.	540
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	N	Q	Y	F	V	D	P	C	K	L	L	L	T	T	P	G	I	D	A	R	N	G	E	Y	E	A	F	G	V	P	A	T	I	L	A	N	F	L	R	E	N	G	V	V	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	K	C	D	L	N	S	I	L
Query Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.										.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.										.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	A	W	H	L	F	I	I	R	V	.	.	.	.	.	.	.	.	D	E	A	R	C	G	I	T	R	D	A	L	X	A	S	L	K	T	K	G	I	G	T	G	L	H	F	R	A	A	H	T	Q	K	Y	Y	R	E	R	F	P	T	L	T	L	P	D	T	E	W	N	S	E	R	I	C	S
Template Known Secondary structure		.	.	.	.	.	.			S							.	.	.	.	.	.	.	.						S	S												T	T	B			B						G	G	G	S							S	T	T											T	T
Template Predicted Secondary structure		.	.	.	.	.	.										.	.	.	.	.	.	.	.
Template SS confidence
								295	.	.	.	.	300	.	.	.									.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
		541	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	L	T	P	A	E	D	M	A	K	L	Q	Q	L	V	A	L	L	V	R	F	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	P	L	F	P	D	X	T	E	S	D	F	D	R	V	I	T	A	L	H	Q	I	A
Template Known Secondary structure						T	T
Template Predicted Secondary structure
Template SS confidence
		361	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions