Job Description P24169 Confidence 99.83% Date Thu Jan 5 11:40:44 GMT 2012 Rank 71 Aligned Residues 308 % Identity 14% Template d1m32a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 2.20

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		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.				.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.			.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.																																				.	.
Query SS confidence																							.	.	.																																				.	.
Query Sequence		E	G	A	P	C	I	A	Q	Q	H	A	A	K	V	F	N	A	D	K	T	Y	.	.	.	F	V	L	N	G	T	S	S	S	N	K	V	V	L	N	A	L	L	T	P	G	D	L	V	L	F	D	R	N	N	H	K	S	N	H	.	.	H	G	A	L	L	Q	A	G	A	T	P	V	Y	L	E	T	A	R	N
Query Conservation																							.	.	.																																				.	.
Alig confidence																							.	.	.																																				.	.		.
Template Conservation																																																																.
Template Sequence		I	G	V	V	E	Q	I	R	Q	Q	L	T	A	L	A	T	A	S	E	G	Y	T	S	V	L	L	Q	G	S	G	S	Y	A	V	E	A	V	L	G	S	A	L	G	P	Q	D	K	V	L	I	V	S	N	G	A	Y	G	A	R	X	V	E	.	X	A	G	L	X	G	I	A	H	H	A	Y	D	C	G	E	V
Template Known Secondary structure		T	T	T														S	S	S	S								S													S			T	T								S	S									.						T										T	T
Template Predicted Secondary structure																																																																.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.		.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.		.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure																																														.
Query SS confidence																																														.
Query Sequence		P	Y	G	F	I	G	G	I	D	A	H	C	F	E	E	S	Y	L	R	E	L	I	A	E	V	A	P	Q	R	A	K	E	A	R	P	F	R	L	A	V	I	Q	L	G	.	T	Y	D	G	T	I	Y	N	A	R	Q	V	V	D	K	I	G	H	L	C	D	Y	I	L	F	D	S	A	W	V	G	Y	E	Q	F
Query Conservation																																														.
Alig confidence			.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.							.																																	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.																																								.	.	.
Template Sequence		A	.	.	.	.	.	.	.	.	.	.	R	P	D	V	Q	A	I	D	A	I	L	N	A	D	P	T	I	S	H	.	.	.	.	.	.	.	.	I	A	X	V	H	S	E	T	T	T	G	X	L	N	P	I	D	E	V	G	A	L	A	H	R	Y	G	K	T	Y	I	V	D	A	X	S	S	F	G	.	.	.
Template Known Secondary structure		S	.	.	.	.	.	.	.	.	.	.															T	T				.	.	.	.	.	.	.	.					S			T	T	T	T																T								T	T	T	T	T	.	.	.
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.																																								.	.	.
Template SS confidence
		115											.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.									.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.									370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.
Query Sequence		I	P	M	M	A	D	C	S	P	L	L	L	D	L	N	E	N	D	P	G	I	L	V	T	Q	S	V	H	K	Q	Q	A	G	F	S	Q	T	S	Q	I	H	K	K	.	.	.	.	.	.	.	.	D	S	H	I	K	G	Q	Q	R	Y	V	P	H	K	R	M	N	N	A	F	M	M	H	A	S	T	S	P	F
Query Conservation																																													.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.													.	.	.	.																							.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.													.	.	.	.
Template Sequence		.	.	.	.	.	G	I	P	X	D	I	A	A	L	H	I	D	.	.	.	.	Y	L	I	S	S	A	N	K	C	I	Q	G	V	P	G	F	A	F	V	I	A	R	E	Q	K	L	A	A	C	K	G	H	S	R	S	L	S	L	D	L	Y	A	Q	W	R	C	X	E	D	N	H	G	K	W	R	F	T	S	P
Template Known Secondary structure		.	.	.	.	.	T	S				T	T	T	T	T		S	.	.	.	.						S	S	S	T	T				S	S												T	T		T	T			S		S	T	T												T	T	T			S	S
Template Predicted Secondary structure		.	.	.	.	.													.	.	.	.
Template SS confidence
							174	.	.	.	.	.	180	.	.	.	.	.					.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	P	L	F	A	A	L	N	I	N	A	K	M	H	E	G	V	S	G	R	N	M	W	M	D	C	V	V	N	G	I	N	A	R	K	L	I	L	D	N	C	Q	H	I	R	P	F	V	P	E	L	V	D	G	K	P	W	Q	S	Y	E	T	A	Q	I	A	V	D	L	R	F	F	Q	F	V	P	G	E	H	W
Query Conservation
Alig confidence																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	H	T	V	L	A	F	A	Q	A	L	K	E	L	A	K	E	G	G	V	A	A	R	H	Q	R	Y	Q	Q	N	Q	R	S	L	V	A	G	X	R	A	L	G	F	N	T	L	L	D	D	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																			T																							T	T			B	S	S		G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
		479	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.				.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.
Predicted Secondary structure																																																									.	.	.
Query SS confidence																																																									.	.	.
Query Sequence		H	S	F	E	G	Y	A	E	N	Q	Y	F	V	D	P	C	K	L	L	L	T	T	P	G	I	D	A	R	N	G	E	Y	E	A	F	G	V	P	A	T	I	L	A	N	F	L	R	E	N	G	V	V	P	E	K	.	.	.	C	D	L	N	S	I	L	F	L	L	T	P	A	E	D	M	A	K	L	Q	Q	L
Query Conservation																																																									.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.																					.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	H	S	P	I	I	T	A	F	Y	S	P	E	D	P	.	.	.	.	.	.	.	.	.	Q	Y	R	F	S	E	F	Y	R	R	L	K	E	Q	G	F	V	I	Y	P	G	K	V	S	Q	S	D	C	F	R	I	G	N	I	G	E	V	Y	A	A	D	I	T	A	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	B		S	S										T	.	.	.	.	.	.	.	.	.	T													T	T									S	S	S									S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.
Template SS confidence
														296	.	.	.	300	.	.	.	.	.	.	.	.	.										310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
		556	.	.	.	560	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	L	L	V	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	T	A	I	R	T
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		355	.	.	.	.	360

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions