Job Description P24169 Confidence 99.77% Date Thu Jan 5 11:40:44 GMT 2012 Rank 93 Aligned Residues 297 % Identity 15% Template d1lc5a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases AAT-like Resolution 1.46

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		166	.	.	.	170	.		.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure								.																						.
Query SS confidence								.																						.
Query Sequence		M	G	D	L	L	I	.	H	E	G	A	P	C	I	A	Q	Q	H	A	A	K	V	F	N	A	D	K	T	.	Y	F	V	L	N	G	T	S	S	S	N	K	V	V	L	N	A	L	L	T	P	G	D	L	V	L	F	D	R	N	N	H	K	S	N	H	H	G	A	L	L	Q	A	G	A	T	P	V	Y	L	E
Query Conservation								.																						.
Alig confidence								.																						.																			.	.																		.
Template Conservation																																																	.	.																		.
Template Sequence		L	D	C	I	E	R	Y	P	D	A	D	Y	F	H	L	H	Q	A	L	A	R	H	H	Q	V	P	A	S	W	I	L	A	G	N	G	E	T	E	S	I	F	T	V	A	S	G	L	.	.	K	P	R	R	A	M	I	V	T	P	G	F	A	E	Y	G	R	.	A	L	A	Q	S	G	C	E	I	R	R	W	S
Template Known Secondary structure		G	G	G	G	G	S				T	T													T	S		G	G	G					S	S													.	.			S							S			T					.					T	T
Template Predicted Secondary structure																																																	.	.																		.
Template SS confidence
		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.			.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.					.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.
Query SS confidence																																																								.	.	.	.
Query Sequence		T	A	R	N	P	Y	G	F	I	G	G	I	D	A	H	C	F	E	E	S	Y	L	R	E	L	I	A	E	V	A	P	Q	R	A	K	E	A	R	P	F	R	L	A	V	I	Q	L	G	T	Y	D	G	T	I	.	.	.	.	Y	N	A	R	Q	V	V	D	K	I	G	H	L	C	D	Y	I	L	F	D	S	A
Query Conservation																																																								.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.													.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.
Template Sequence		L	R	.	.	.	.	.	.	.	.	.	.	.	E	A	D	G	W	Q	L	T	D	A	I	L	E	A	L	T	P	D	L	D	C	.	.	.	.	.	.	.	.	L	F	L	C	T	P	N	N	P	T	G	L	L	P	E	R	P	L	L	Q	A	I	A	D	R	C	K	S	L	N	I	N	L	I	L	D	E	A
Template Known Secondary structure				.	.	.	.	.	.	.	.	.	.	.	G	G	G	T	T				T	T							T	T				.	.	.	.	.	.	.	.					S	S		T	T	T																				T								T
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.
Template SS confidence
		127	.												.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.									150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	V	G	Y	E	Q	F	I	P	M	M	A	D	C	S	P	L	L	L	D	L	N	E	N	D	P	G	I	L	V	T	Q	S	V	H	K	Q	Q	A	G	F	S	Q	T	S	Q	I	H	K	K	D	S	H	I	K	G	Q	Q	R	Y	V	P	H	K	R	M	N	N	A	F	M	M	H	A	S	T	S	P	F	Y
Query Conservation
Alig confidence			.							.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.							.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	.	I	D	F	I	P	H	.	.	.	.	.	.	E	T	G	F	I	P	A	L	K	D	N	P	H	I	W	V	L	R	S	L	T	K	F	Y	A	I	P	G	L	R	L	G	Y	L	V	.	.	.	.	.	.	.	.	.	.	.	N	S	D	D	A	A	M	A	R	M	R	R	Q	Q	M	P	W	S	V	N
Template Known Secondary structure		T	.	G	G	G	S	T	T	.	.	.	.	.	.				S	G	G	G		T	T		T	T							S	T	T	T	T	T		T	T	T							.	.	.	.	.	.	.	.	.	.	.														S		T	T		S
Template Predicted Secondary structure			.							.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		188		.	190	.	.	.	.							.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.												230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	F	A	A	L	N	I	N	A	K	M	H	E	G	V	S	G	R	N	M	W	M	D	C	V	V	N	G	I	N	A	R	K	L	I	L	D	N	C	Q	H	I	R	P	F	V	P	E	L	V	D	G	K	P	W	Q	S	Y	E	T	A	Q	I	A	V	D	L	R	F	F	Q	F	V	P	G	E	H	W	H
Query Conservation
Alig confidence																		.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	L	A	A	L	A	G	E	V	A	L	Q	D	S	A	W	.	Q	Q	A	T	W	H	W	L	R	E	E	G	A	R	F	Y	Q	A	L	C	Q	L	P	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure											G	G	G					.																					T	S	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																		.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.		.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
		480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540					.	.	.	.	.	.	.	.	.	550	.	.	.	.	.
Predicted Secondary structure																																																															.	.	.	.
Query SS confidence																																																															.	.	.	.
Query Sequence		S	F	E	G	Y	A	E	N	Q	Y	F	V	D	P	C	K	L	L	L	T	T	P	G	I	D	A	R	N	G	E	Y	E	A	F	G	V	P	A	T	I	L	A	N	F	L	R	E	N	G	V	V	P	E	K	C	D	L	N	S	I	L	.	.	.	.	F	L	L	T	P	A	E	D	M	A	K	L	Q	Q	L
Query Conservation																																																															.	.	.	.
Alig confidence		.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.							.
Template Conservation		.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.																																						.
Template Sequence		.	.	.	.	.	.	.	T	V	Y	P	G	R	A	N	Y	L	L	L	R	C	.	.	.	.	.	.	.	.	.	.	.	.	.	E	R	E	D	I	D	L	Q	R	R	L	L	T	Q	R	I	L	I	R	S	C	A	N	Y	P	G	L	D	S	R	Y	Y	R	V	A	I	R	.	S	A	A	Q	N	E	R	L
Template Known Secondary structure		.	.	.	.	.	.	.						S	S	S							.	.	.	.	.	.	.	.	.	.	.	.	.	S		T	T									T	T	T							T	T	S	T	T			T	T								.
Template Predicted Secondary structure		.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.																																						.
Template SS confidence
									291	.	.	.	.	.	.	.	.	300	.	.	.	.														.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.		.	.	.	.	.	.	.	.
		556	.	.	.	560	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	L	L	V	R	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	A	L	R	N	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		350	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions