Job Description P24169 Confidence 99.88% Date Thu Jan 5 11:40:44 GMT 2012 Rank 42 Aligned Residues 312 % Identity 15% Template d1h0ca_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 2.5

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		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190			.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure																		.	.
Query SS confidence																		.	.
Query Sequence		A	P	C	I	A	Q	Q	H	A	A	K	V	F	N	A	D	.	.	K	T	Y	F	V	L	N	G	T	S	S	S	N	K	V	V	L	N	A	L	L	T	P	G	D	L	V	L	F	D	R	N	N	H	K	S	N	H	H	G	A	L	L	Q	A	G	A	T	P	V	Y	L	E	T	A	R	N	P	Y	G	F	I
Query Conservation																		.	.
Alig confidence																		.	.																																								.																			.	.	.	.
Template Conservation																																																											.																			.	.	.	.
Template Sequence		I	M	D	E	I	K	E	G	I	Q	Y	V	F	Q	T	R	N	P	L	T	L	V	I	S	G	S	G	H	C	A	L	E	A	A	L	V	N	V	L	E	P	G	D	S	F	L	V	G	A	N	G	I	W	G	Q	R	A	.	V	D	I	G	E	R	I	G	V	H	P	M	T	K	D	P	G	G	.	.	.	.
Template Known Secondary structure															T				S						S	S																S	S							B	S	S							.										B			B			T	T		.	.	.	.
Template Predicted Secondary structure																																																											.																			.	.	.	.
Template SS confidence
		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	I	D	A	H	C	F	E	E	S	Y	L	R	E	L	I	A	E	V	A	P	Q	R	A	K	E	A	R	P	F	R	L	A	V	I	Q	L	G	T	Y	D	G	T	I	Y	N	A	R	Q	V	V	D	K	I	G	H	L	C	D	Y	I	L	F	D	S	A	W	V	G	Y	E	Q	F	I	P	M	M	A	D
Query Conservation
Alig confidence		.	.	.	.	.	.																				.	.	.	.	.	.	.	.																																													.	.	.
Template Conservation		.	.	.	.	.	.																				.	.	.	.	.	.	.	.																																													.	.	.
Template Sequence		.	.	.	.	.	.	H	Y	T	L	Q	E	V	E	E	G	L	A	Q	H	K	P	V	L	L	.	.	.	.	.	.	.	.	F	L	T	H	G	E	S	S	T	G	V	L	Q	P	L	D	G	F	G	E	L	C	H	R	Y	K	C	L	L	L	V	D	S	V	A	S	L	G	G	T	P	L	Y	M	.	.	.
Template Known Secondary structure		.	.	.	.	.	.																	S			.	.	.	.	.	.	.	.				S			T	T	T	T						T	T							T	T	T								T	T	T	T	T	T	S				T	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.																				.	.	.	.	.	.	.	.																																													.	.	.
Template SS confidence
								133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.									.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.									.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.						.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.																						.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.																						.	.	.	.	.
Query Sequence		C	S	P	L	L	L	D	L	N	E	N	D	P	G	I	L	V	T	Q	S	V	H	K	Q	Q	A	G	F	S	Q	T	S	Q	I	H	K	K	D	S	H	.	.	.	.	.	.	.	.	I	K	G	Q	Q	R	Y	V	P	H	K	R	M	N	N	A	F	M	M	H	A	.	.	.	.	.	S	T	S	P	F	Y
Query Conservation																																										.	.	.	.	.	.	.	.																						.	.	.	.	.
Alig confidence		.	.	.	.	.							.	.	.	.																										.	.	.	.	.	.	.	.																						.	.	.	.	.
Template Conservation		.	.	.	.	.							.	.	.	.
Template Sequence		.	.	.	.	.	D	R	Q	G	I	D	.	.	.	.	I	L	Y	S	G	S	Q	K	A	L	N	A	P	P	G	T	S	L	I	S	F	S	D	K	A	K	K	K	M	Y	S	R	K	T	K	P	F	S	F	Y	L	D	I	K	W	L	A	N	F	W	G	C	D	D	Q	P	R	M	Y	H	H	T	I	P	V
Template Known Secondary structure		.	.	.	.	.	T	T	T	T		S	.	.	.	.						S	S	S	T	T				T	T															T	T		S	S			S		S	T	T									T	T		S	S	S						S
Template Predicted Secondary structure		.	.	.	.	.							.	.	.	.
Template SS confidence
							196	.	.	.	200	.					.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	F	A	A	L	N	I	N	A	K	M	H	E	G	V	S	G	R	N	M	W	M	D	C	V	V	N	G	I	N	A	R	K	L	I	L	D	N	C	Q	H	I	R	P	F	V	P	E	L	V	D	G	K	P	W	Q	S	Y	E	T	A	Q	I	A	V	D	L	R	F	F	Q	F	V	P	G	E	H	W	H
Query Conservation
Alig confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	S	L	Y	S	L	R	E	S	L	A	L	I	A	E	Q	G	L	E	N	S	W	R	Q	H	R	E	A	A	A	Y	L	H	G	R	L	Q	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
		480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.		.	.	.	.	.	530					.	.	.	.	.	.	.	.	.	540	.		.	.	.	.	.	.	.	.	550	.	.	.
Predicted Secondary structure																																															.							.	.	.	.												.
Query SS confidence																																															.							.	.	.	.												.
Query Sequence		S	F	E	G	Y	A	E	N	Q	Y	F	V	D	P	C	K	L	L	L	T	T	P	G	I	D	A	R	N	G	E	Y	E	A	F	G	V	P	A	T	I	L	A	N	F	L	.	R	E	N	G	V	V	.	.	.	.	P	E	K	C	D	L	N	S	I	L	F	.	L	L	T	P	A	E	D	M	A	K	L	Q
Query Conservation																																															.							.	.	.	.												.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.												.							.	.	.	.												.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	L	Q	L	F	V	K	D	P	A	L	R	L	P	T	V	T	T	V	A	V	P	A	.	.	.	.	.	.	.	.	.	.	.	G	Y	D	W	R	D	I	V	S	Y	V	I	D	H	F	D	I	E	I	M	G	G	L	G	P	S	T	G	K	V	L	R	I	G	L	L	G	C	N	A	T	R	E	N	V	D
Template Known Secondary structure		T			B	S	S		S	G	G	G	B		T	T								T	.	.	.	.	.	.	.	.	.	.	.	T																							G	G	G	T	T	T								G	G	G		S
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.												.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
		554	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	V	A	L	L	V	R	F	E	K	L	L	E	S	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	V	T	E	A	L	R	A	A	L	Q	H	C	P	K	K
Template Known Secondary structure														S
Template Predicted Secondary structure
Template SS confidence
		375	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions