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Job DescriptionP24169
Confidence99.67%DateThu Jan 5 11:40:44 GMT 2012
Rank149Aligned Residues370
% Identity15%Templated1gdea_
SCOP infoPLP-dependent transferase-like PLP-dependent transferases AAT-like
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   99100.........110.........120.........130.........140.........150.........160.........170........
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Query Sequence  AASHYETQLRPPFFRALVDYVNQGNSAFDCPGHQGGEFFRRHPAGNQFVEYFGEALFRADLCNADVAMGDLLIHEGAPCI
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Template Sequence  ALSDRLELVSASEIRKLFDIAAGMKDVISL. . . . . GIGEPDFDTPQHIKEYAKEALDK. . . . . . . . GLTHYGPNIGL. LE
Template Known Secondary structure 
S



TT

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S

S


T........T

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TT

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   2.......10.........20.........30. ........40.........50.... .....60..... ..
 
   179180.........190. ........200.........210.........220.........230.........240.........250
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Query Sequence  AQQHAAKVFNADK. . . . . . . . TYFVLNGTSSSNKVVLNALLTPGDLVLFDRNNHKSNHHGALLQAGATPVYLETARNPYG
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Template Sequence  LREAIAEKLKKQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAP. AVILAGGKPVEVPTYEEDEF
Template Known Secondary structure 




TTTSSSTTTTT

TT
S

TT.T


GGGTT
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   68.70.........80.........90.........100.........110.........120...... ...130.........140......
 
   251........260.........270.........280.........290....... ..300.........310.........320.......
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Query Sequence  FIGGIDAHCFEESYLRELIAEVAPQRAKEARPFRLAVIQLGTYDGTI. . . YNARQVVDKIGHLCDYILFDSAWVGYEQFI
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Template Sequence  RL. . . . . . . . NVDELKKYVTDKTRAL. . . . . . . . . IINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYE. HFIYD
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TT.........SS
TTT




TT

TTT.T
B
T
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   147. .150.........160.... .....170.........180.........190.........200... .....
 
   328.330.........340.........350.........360.........370.........380.........390.........400.......
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Query Sequence  PMMADCSPLLLDLNENDPGILVTQSVHKQQAGFSQTSQIHKKDSHIKGQQRYVPHKRMNNAFMMHASTSPFYPLFAALNI
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Template Sequence  . . . DARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVA. . . . . . . . . . . APSWIIERMVKFQMYNATCPVTFIQYAA
Template Known Secondary structure  ...T




GGGSTT
GGGSTTTTT
GGG

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TTT
S

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   209210.........220.........230.........240...... ...250.........260.........270....
 
   408.410.........420.........430.........440.........450.........460.........470.........480.......
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Query Sequence  NAKMHEGVSGRNMWMDCVVNGINARKLILDNCQHIRPFVPELVDGKPWQSYETAQIAVDLRFFQFVPGEHWHSFEGYAEN
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Template Sequence  AKALKDER. SWKAVEEMRKEYDRRRKLVWKRLNE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . MGLPTVKPK
Template Known Secondary structure  T
......................................TT






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   275....280.. .......290.........300....... ..310......
 
   488.490.........500.........510.........520.... .....530.........540 .........550.........560..
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Query Sequence  QYFVDPCKLLLTTPGIDARNGEYEAFGVPATILANFL. RENGVVPEKCDLNSIL. . . . FLLTPAEDMAKLQQLVALLVRF
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Template Sequence  GAFY. . . . IFP. . . . . . . . . . RIRDTGLTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYATAYEKLEEAMDRMERV
Template Known Secondary structure  BTT....

..........B
GGGT

T

GGGG
GGGTTB

S
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   317..320 ... ......330.........340.........350.........360.........370.........380..
 
   563....
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Query Sequence  EKLLE
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Template Conservation 
 
 
Template Sequence  LKERK
Template Known Secondary structure  TT
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   383....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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