Job Description P24169 Confidence 99.78% Date Thu Jan 5 11:40:44 GMT 2012 Rank 90 Aligned Residues 318 % Identity 13% Template d1c7na_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 1.90

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		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.				.	.	.	190				.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																						.	.	.					.	.	.
Query SS confidence																						.	.	.					.	.	.
Query Sequence		G	D	L	L	I	H	E	G	A	P	C	I	A	Q	Q	H	A	A	K	V	.	.	.	F	N	A	D	.	.	.	K	T	Y	F	V	L	N	G	T	S	S	S	N	K	V	V	L	N	A	L	L	T	P	G	D	L	V	L	F	D	R	N	N	H	K	S	N	H	H	G	A	L	L	Q	A	G	A	T	P	V
Query Conservation																						.	.	.					.	.	.
Alig confidence																						.	.	.					.	.	.																																								.
Template Conservation																																																																							.
Template Sequence		T	V	L	G	Y	T	G	P	T	E	E	Y	K	K	T	V	K	K	W	M	K	D	R	H	Q	W	D	I	Q	T	D	W	I	I	N	T	A	G	V	V	P	A	V	F	N	A	V	R	E	F	T	K	P	G	D	G	V	I	I	I	T	P	V	Y	Y	P	F	F	M	.	A	I	K	N	Q	E	R	K	I	I
Template Known Secondary structure					S	S																									G	G	G					S	S															T	T							S	S			T					.				T	T	T
Template Predicted Secondary structure																																																																							.
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.					.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.
Query SS confidence																																																												.	.	.	.
Query Sequence		Y	L	E	T	A	R	N	P	Y	G	F	I	G	G	I	D	A	H	C	F	E	E	S	Y	L	R	E	L	I	A	E	V	A	P	Q	R	A	K	E	A	R	P	F	R	L	A	V	I	Q	L	G	T	Y	D	G	T	I	Y	.	.	.	.	N	A	R	Q	V	V	D	K	I	G	H	L	C	D	Y	I	L	F
Query Conservation																																																												.	.	.	.
Alig confidence													.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.														.	.	.	.
Template Conservation													.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.
Template Sequence		E	C	E	L	L	E	K	D	G	Y	Y	.	.	.	.	.	.	.	T	I	D	F	Q	K	L	E	K	L	S	K	D	K	N	N	K	A	.	.	.	.	.	.	.	.	.	L	L	F	C	S	P	H	N	P	V	G	R	V	W	K	K	D	E	L	Q	K	I	K	D	I	V	L	K	S	D	L	M	L	W	S
Template Known Secondary structure									T	T			.	.	.	.	.	.	.												T		T	T				.	.	.	.	.	.	.	.	.					S	S	B	T	T	T	T	B																	S	S
Template Predicted Secondary structure													.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.								150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.										.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.			.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure																																												.	.
Query SS confidence																																												.	.
Query Sequence		D	S	A	W	V	G	Y	E	Q	F	I	P	M	M	A	D	C	S	P	L	L	L	D	L	N	E	N	D	P	G	I	L	V	T	Q	S	V	H	K	Q	Q	A	.	.	G	F	S	Q	T	S	Q	I	H	K	K	D	S	H	I	K	G	Q	Q	R	Y	V	P	H	K	R	M	N	N	A	F	M	M	H	A	S
Query Conservation																																												.	.
Alig confidence																														.	.	.												.	.													.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.																										.	.	.	.	.	.	.	.	.
Template Sequence		D	E	I	H	F	D	L	I	M	P	G	Y	E	H	T	V	F	Q	S	I	D	E	Q	L	A	D	K	T	.	.	.	I	T	F	T	A	P	S	K	T	F	N	I	A	G	M	G	M	S	N	I	I	I	K	N	P	.	.	.	.	.	.	.	.	.	D	I	R	E	R	F	T	K	S	R	D	A	T	S	G
Template Known Secondary structure				T	T	T	T		B		T	T						G	G	G	S						T	T		.	.	.						S					T		G	G	G											.	.	.	.	.	.	.	.	.													T	T
Template Predicted Secondary structure																														.	.	.																										.	.	.	.	.	.	.	.	.
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230				.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.										.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
		395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	S	P	F	Y	P	L	F	A	A	L	N	I	N	A	K	M	H	E	G	V	S	G	R	N	M	W	M	D	C	V	V	N	G	I	N	A	R	K	L	I	L	D	N	C	Q	H	I	R	P	F	V	P	E	L	V	D	G	K	P	W	Q	S	Y	E	T	A	Q	I	A	V	D	L	R	F	F	Q	F	V	P
Query Conservation
Alig confidence																							.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	P	F	T	T	L	G	Y	K	A	C	E	I	C	Y	K	E	C	G	K	W	.	L	D	G	C	I	K	V	I	D	K	N	Q	R	I	V	K	D	F	F	E	V	N	H	P	E	I	K	A	P	L	I	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																							.																								T	T	S	B					S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																							.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.		.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
		475	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.		.	.	.	.	.	530	.	.	.	.	.	.	.	.	.					540	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.																.	.	.	.
Query SS confidence																																																				.																.	.	.	.
Query Sequence		G	E	H	W	H	S	F	E	G	Y	A	E	N	Q	Y	F	V	D	P	C	K	L	L	L	T	T	P	G	I	D	A	R	N	G	E	Y	E	A	F	G	V	P	A	T	I	L	A	N	F	L	.	R	E	N	G	V	V	P	E	K	C	D	L	N	S	I	.	.	.	.	L	F	L	L	T	P	A	E	D	M
Query Conservation																																																				.																.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.																	.																.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T	Y	L	Q	W	I	.	.	.	.	.	.	.	.	.	.	D	F	R	A	L	K	M	D	H	K	A	M	E	E	F	M	I	H	K	A	Q	I	F	F	D	E	G	Y	I	F	G	D	G	G	I	G	F	E	R	I	N	L	A	A	P	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B	S	S					.	.	.	.	.	.	.	.	.	.			G	G	G														T	T							G	G	G	G		G	G	G	T	T								S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.
Template SS confidence
																			324	.	.	.	.	.	330											.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.
		550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	L	Q	Q	L	V	A	L	L	V	R	F	E	K	L	L	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	V	I	Q	E	S	L	E	R	L	N	K	A	L	K	D	L	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		377	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions