Job Description P24169 Confidence 99.59% Date Thu Jan 5 11:40:44 GMT 2012 Rank 183 Aligned Residues 283 % Identity 14% Template c3p1tB_ PDB info PDB header:transferase Chain: B: PDB Molecule:putative histidinol-phosphate aminotransferase; PDBTitle: crystal structure of a putative aminotransferase (bpsl1724) from2 burkholderia pseudomallei k96243 at 2.60 a resolution Resolution 2.60 Å

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		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		L	I	H	E	G	A	P	C	I	A	Q	Q	H	A	A	K	V	F	N	A	D	.	K	T	Y	F	V	L	N	G	T	S	S	S	N	K	V	V	L	N	A	L	L	T	P	G	D	L	V	L	F	D	R	N	N	H	K	S	N	H	H	G	A	L	L	Q	A	G	A	T	P	V	Y	L	E	T	A	R	N	P
Query Conservation																							.
Alig confidence																							.																					.	.																		.
Template Conservation																																												.	.																		.
Template Sequence		R	Y	P	F	D	A	E	P	R	V	X	R	K	L	A	E	H	F	S	C	P	E	D	N	L	X	L	V	R	G	I	D	E	C	F	D	R	I	S	A	E	F	.	.	S	S	X	R	F	V	T	A	W	P	G	F	D	G	Y	R	A	.	R	I	A	V	S	G	L	R	H	F	E	I	G	L	T	D	D	L
Template Known Secondary structure		S			T	T													T	T	S		G	G	G					S													S	.	.	T	T	S						S	S	S		S					.						T								B		T	T	S
Template Predicted Secondary structure																																												.	.																		.
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.			.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	G	F	I	G	G	I	D	A	H	C	F	E	E	S	Y	L	R	E	L	I	A	E	V	A	P	Q	R	A	K	E	A	R	P	F	R	L	A	V	I	Q	L	G	T	Y	D	G	T	I	Y	N	A	R	Q	V	V	D	K	I	G	H	L	C	D	Y	I	L	F	D	S	A	W	V	G	Y	E	Q	F	I	P
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																							.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																							.
Template Sequence		L	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	N	D	L	A	Q	V	S	R	D	D	C	V	V	L	A	N	P	S	N	P	T	G	Q	A	L	S	A	G	E	L	D	Q	L	R	Q	R	A	G	K	L	L	I	D	E	T	Y	V	D	Y	S	S	F	R	.
Template Known Secondary structure		S	B		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T			T	T							S	S		T	T	T																	S							T	T	G	G	G	S	S		S	.
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																							.
Template SS confidence
		123	.	.																							.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.		.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
Predicted Secondary structure																																.
Query SS confidence																																.
Query Sequence		M	M	A	D	C	S	P	L	L	L	D	L	N	E	N	D	P	G	I	L	V	T	Q	S	V	H	K	Q	Q	A	.	G	F	S	Q	T	S	Q	I	H	K	K	D	S	H	I	K	G	Q	Q	R	Y	V	P	H	K	R	M	N	N	A	F	M	M	H	A	S	T	S	P	F	Y	P	L	F	A	A	L	N	I
Query Conservation																																.
Alig confidence		.	.	.	.	.											.	.	.	.												.										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.											.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	A	R	G	L	A	Y	G	E	N	E	.	.	.	.	L	V	F	R	S	F	S	K	S	Y	G	L	A	G	L	R	L	G	A	L	F	.	.	.	.	.	.	.	.	.	.	.	.	G	P	S	E	L	I	A	A	X	K	R	K	Q	W	F	C	N	V	G	T	L	D	L	H	A	L	E	A
Template Known Secondary structure		.	.	.	.	.	T	T					B	T	T		.	.	.	.						S	S	S	T	T	S		T	T	T							.	.	.	.	.	.	.	.	.	.	.	.											T	T	S		T	T	S	S
Template Predicted Secondary structure		.	.	.	.	.											.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
							180	.	.	.	.	.	.	.	.	.					190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210													.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		408	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	K	M	H	E	G	V	S	G	R	N	M	W	M	D	C	V	V	N	G	I	N	A	R	K	L	I	L	D	N	C	Q	H	I	R	P	F	V	P	E	L	V	D	G	K	P	W	Q	S	Y	E	T	A	Q	I	A	V	D	L	R	F	F	Q	F	V	P	G	E	H	W	H	S	F	E	G	Y	A	E	N
Query Conservation
Alig confidence					.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	L	D	.	.	.	.	.	.	N	D	R	A	R	E	A	H	I	A	K	T	L	A	Q	R	R	R	V	A	D	A	L	R	G	L	G	Y	R	V	A	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				S	.	.	.	.	.	.																										T	T			B				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure					.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		239	240	.							.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
		488	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.					.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.
Predicted Secondary structure																																																		.	.	.	.
Query SS confidence																																																		.	.	.	.
Query Sequence		Q	Y	F	V	D	P	C	K	L	L	L	T	T	P	G	I	D	A	R	N	G	E	Y	E	A	F	G	V	P	A	T	I	L	A	N	F	L	R	E	N	G	V	V	P	E	K	C	D	.	.	.	.	L	N	S	I	L	F	L	L	T	P	A	E	D	M	A	K	L	Q	Q	L	V	A	L	L	V	R	F	E
Query Conservation																																																		.	.	.	.
Alig confidence		.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.										.	.	.
Template Conservation		.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.
Template Sequence		.	.	.	.	E	A	N	F	V	L	V	E	N	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	E	R	T	L	R	F	L	R	E	R	G	I	Q	V	K	D	A	G	Q	F	G	L	H	H	H	I	R	I	S	I	G	.	.	.	R	E	E	D	N	D	R	L	L	A	A	L	A	E	Y	S
Template Known Secondary structure		.	.	.	.	S	S	S							T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T										T	T						G	G	G	G	T			S								.	.	.																T
Template Predicted Secondary structure		.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.
Template SS confidence
						275	.	.	.	.	280	.	.	.	.															.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.				.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
		564
Predicted Secondary structure
Query SS confidence
Query Sequence		K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		334

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions