Job Description P24169 Confidence 99.60% Date Thu Jan 5 11:40:44 GMT 2012 Rank 177 Aligned Residues 307 % Identity 12% Template c3nx3A_ PDB info PDB header:transferase Chain: A: PDB Molecule:acetylornithine aminotransferase; PDBTitle: crystal structure of acetylornithine aminotransferase (argd) from2 campylobacter jejuni Resolution 1.80 Å

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		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210								.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.
Query Sequence		H	E	G	A	P	C	I	A	Q	Q	H	A	A	K	V	F	N	A	D	K	T	Y	F	V	L	N	G	T	S	S	S	N	K	V	V	L	N	A	L	.	.	.	.	.	.	.	L	T	P	G	D	L	V	L	F	D	R	N	N	H	K	S	N	H	H	G	A	L	L	Q	A	G	A	T	P	V	Y	L	E	T
Query Conservation																																									.	.	.	.	.	.	.
Alig confidence																																									.	.	.	.	.	.	.																					.
Template Conservation																																																																				.
Template Sequence		Y	N	E	N	I	A	A	A	A	K	N	L	A	K	A	S	A	L	E	R	V	F	F	T	N	S	G	T	E	S	I	E	G	A	X	K	T	A	R	K	Y	A	F	N	K	G	V	K	G	G	Q	F	I	A	F	K	H	S	F	H	G	R	T	L	G	A	.	L	S	L	T	A	N	E	K	Y	Q	K	P	F
Template Known Secondary structure																		T		S						S	S																			T	T		T	T							T	T					S	S				.		T	T								G	G	G
Template Predicted Secondary structure																																																																				.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.		.	.	.	.	.	.	.	.	150	.	.	.	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.			.	.	.	.					.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.					.	.	.	.
Query SS confidence																																																				.	.					.	.	.	.
Query Sequence		A	R	N	P	Y	G	F	I	G	G	I	D	A	H	C	F	E	E	S	Y	L	R	E	L	I	A	E	V	A	P	Q	R	A	K	E	A	R	P	F	R	L	A	V	I	Q	L	G	T	Y	D	.	.	G	T	I	Y	.	.	.	.	N	A	R	Q	V	V	D	K	I	G	H	L	C	D	Y	I	L	F	D	S
Query Conservation																																																				.	.					.	.	.	.
Alig confidence										.	.	.	.	.	.																				.	.	.	.	.	.	.	.										.	.					.	.	.	.
Template Conservation										.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Template Sequence		K	P	L	I	S	G	V	K	.	.	.	.	.	.	F	A	K	Y	N	D	I	S	S	V	E	K	L	V	N	E	K	T	C	.	.	.	.	.	.	.	.	A	I	I	L	E	S	V	Q	G	E	G	G	I	N	P	A	N	K	D	F	Y	K	A	L	R	K	L	C	D	E	K	D	I	L	L	I	A	D	E
Template Known Secondary structure			S			S				.	.	.	.	.	.				T	T							T	T			T	T			.	.	.	.	.	.	.	.						S				T	T	S																				T
Template Predicted Secondary structure										.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Template SS confidence
		155	.	.	.	.	160	.	.							.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.									.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	W	V	G	Y	E	Q	F	I	P	M	M	A	D	C	S	P	L	L	L	D	L	N	E	N	D	P	G	I	L	V	T	Q	S	V	H	K	Q	Q	A	G	F	S	Q	T	S	Q	I	H	K	K	D	S	H	I	K	G	Q	Q	R	Y	V	P	H	K	R	M	N	N	A	F	M	M	H	A	S	T	S	P	F
Query Conservation
Alig confidence									.	.	.	.	.														.	.	.	.																									.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.														.	.	.	.																									.	.	.	.	.	.	.	.	.
Template Sequence		I	Q	C	G	X	G	R	.	.	.	.	.	S	G	K	F	F	A	Y	E	H	A	Q	I	L	.	.	.	.	P	D	I	X	T	S	A	K	A	L	G	C	G	L	S	V	G	A	F	V	I	N	Q	K	.	.	.	.	.	.	.	.	.	V	A	S	N	S	L	E	A	G	D	H	G	S	T	Y	G	G	N
Template Known Secondary structure		T	T	T	T	T	T	T	.	.	.	.	.	T	S	S	S	S	G	G	G	G	G	T			.	.	.	.		S						G	G	G	T	T	T	S											.	.	.	.	.	.	.	.	.						S		T	T			S	S		B	S
Template Predicted Secondary structure									.	.	.	.	.														.	.	.	.																									.	.	.	.	.	.	.	.	.
Template SS confidence
		221	.	.	.	.	.	.						.	.	230	.	.	.	.	.	.	.	.	.	240					.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.										.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	P	L	F	A	A	L	N	I	N	A	K	M	H	E	G	V	S	G	R	N	M	W	M	D	C	V	V	N	G	I	N	A	R	K	L	I	L	D	N	C	Q	H	I	R	P	F	V	P	E	L	V	D	G	K	P	W	Q	S	Y	E	T	A	Q	I	A	V	D	L	R	F	F	Q	F	V	P	G	E	H	W
Query Conservation
Alig confidence																	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	L	V	C	A	G	V	N	A	V	F	E	I	F	K	.	.	.	E	E	K	I	L	E	N	V	N	K	L	T	P	Y	L	E	Q	S	L	D	E	L	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																	.	.	.		T	T																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.				.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		479	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	S	F	E	G	Y	A	E	N	Q	Y	F	V	D	P	C	K	L	L	L	T	T	P	G	I	D	A	R	N	G	E	Y	E	A	F	G	V	P	A	T	I	L	A	N	F	L	R	E	N	G	V	V	P	E	K	C	D	L	N	S	I	L	F	L	L	T	P	A	E	D	M	A	K	L	Q	Q	L	V	A	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	N	E	F	D	F	C	K	K	R	K	G	L	G	F	X	Q	G	L	S	L	D	K	S	V	K	V	A	K	V	I	Q	K	C	Q	E	N	A	L	L	L	I	S	C	G	E	N	D	L	R	F	L	P	P	L	I	L	Q	K	E	H	I	D	E	X	S	E	K
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.				T	T								T	T								T	T	S												T	T							T	T	T								T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
															321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
		559	560	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	R	F	E	K	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	R	K	A	L	K	S	F
Template Known Secondary structure								T
Template Predicted Secondary structure
Template SS confidence
		388	.	390	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions