Job Description P24169 Confidence 99.64% Date Thu Jan 5 11:40:44 GMT 2012 Rank 170 Aligned Residues 308 % Identity 17% Template c3lvmB_ PDB info PDB header:transferase Chain: B: PDB Molecule:cysteine desulfurase; PDBTitle: crystal structure of e.coli iscs Resolution 2.05 Å

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		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.					.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230			.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure																				.																				.	.	.	.																				.	.
Query SS confidence																				.																				.	.	.	.																				.	.
Query Sequence		A	P	C	I	A	Q	Q	H	A	A	K	V	F	N	A	D	K	T	.	Y	F	V	L	N	G	T	S	S	S	N	K	V	V	L	N	A	L	L	.	.	.	.	T	P	G	D	L	V	L	F	D	R	N	N	H	K	S	N	H	H	G	.	.	A	L	L	Q	A	G	A	T	P	V	Y	L	E	T	A	R	N
Query Conservation																				.																				.	.	.	.																				.	.
Alig confidence																				.																				.	.	.	.																				.	.
Template Conservation
Template Sequence		A	V	D	I	A	R	N	Q	I	A	D	L	V	G	A	D	P	R	E	I	V	F	T	S	G	A	T	E	S	D	N	L	A	I	K	G	A	A	N	F	Y	Q	K	K	G	K	H	I	I	T	S	K	T	E	H	K	A	V	L	D	T	C	R	Q	L	E	R	E	G	F	E	V	T	Y	L	A	P	Q	R	N
Template Known Secondary structure															T			G	G	G					S	S																T	T	T	T								T	T	S														T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.		.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure																																														.
Query SS confidence																																														.
Query Sequence		P	Y	G	F	I	G	G	I	D	A	H	C	F	E	E	S	Y	L	R	E	L	I	A	E	V	A	P	Q	R	A	K	E	A	R	P	F	R	L	A	V	I	Q	L	G	.	T	Y	D	G	T	I	Y	N	A	R	Q	V	V	D	K	I	G	H	L	C	D	Y	I	L	F	D	S	A	W	V	G	Y	E	Q	F
Query Conservation																																														.
Alig confidence				.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.							.																															.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.
Template Sequence		G	I	.	.	.	.	.	.	.	.	.	.	I	D	L	K	E	L	E	A	A	M	R	D	D	T	I	L	.	.	.	.	.	.	.	.	.	.	V	S	I	M	H	V	N	N	E	I	G	V	V	Q	D	I	A	A	I	G	E	M	C	R	A	R	G	I	I	Y	H	V	D	A	T	Q	S	.	.	.	.	.
Template Known Secondary structure		S		.	.	.	.	.	.	.	.	.	.												T	T				.	.	.	.	.	.	.	.	.	.					S	B		T	T	T		B	B														T								T	T	T	.	.	.	.	.
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.
Template SS confidence
		130	.											.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.											.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	P	M	M	A	D	C	S	P	L	L	L	D	L	N	E	N	D	P	G	I	L	V	T	Q	S	V	H	K	Q	Q	A	G	F	S	Q	T	S	Q	I	H	K	K	D	S	H	I	K	G	Q	Q	R	Y	V	P	H	K	R	M	N	N	A	F	M	M	H	A	S	T	S	P	F	Y	P	L	F	A	A	L	N
Query Conservation
Alig confidence		.	.	.															.	.	.	.													.																															.	.	.
Template Conservation		.	.	.															.	.	.	.													.																															.	.	.
Template Sequence		.	.	.	V	G	K	L	P	I	D	L	S	Q	L	K	V	D	.	.	.	.	L	M	S	F	S	G	H	K	I	Y	G	P	.	K	G	I	G	A	L	Y	V	R	R	K	P	R	V	R	I	E	A	Q	M	H	G	G	G	H	E	R	G	M	R	.	.	.	S	G	T	L	P	V	H	Q	I	V	G	M	G
Template Known Secondary structure		.	.	.	T	T	T	S				T	T	T	S			S	.	.	.	.						S	T	T	T	T	S		.	S	S								B	T	T	B						S	S		S	S		T	T	T	T	T		.	.	.		S
Template Predicted Secondary structure		.	.	.															.	.	.	.													.																															.	.	.
Template SS confidence
					185	.	.	.	.	190	.	.	.	.	.	.	.	.					.	200	.	.	.	.	.	.	.	.	.	210		.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240				.	.	.	.	.	.	.	.	.	250	.	.	.
		407	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	N	A	K	M	H	E	G	V	S	G	R	N	M	W	M	D	C	V	V	N	G	I	N	A	R	K	L	I	L	D	N	C	Q	H	I	R	P	F	V	P	E	L	V	D	G	K	P	W	Q	S	Y	E	T	A	Q	I	A	V	D	L	R	F	F	Q	F	V	P	G	E	H	W	H	S	F	E	G	Y	A	E
Query Conservation
Alig confidence											.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	A	Y	R	I	A	K	E	E	.	M	A	T	E	M	E	R	L	R	G	L	R	N	R	L	W	N	G	I	K	D	I	E	E	V	Y	L	N	G	D	L	E	H	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure											.																				T	T	S	T	T					S		S	S	S	B	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure											.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		254	.	.	.	.	.	260	.	.		.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
		487	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.																	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	Q	Y	F	V	D	P	C	K	L	L	L	T	T	P	G	I	D	A	R	N	G	E	Y	E	A	F	G	V	P	A	T	I	L	A	N	F	L	R	E	N	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	P	E	K	C	D	L	N	S	I	L	F	L	L	T	P	A	E	D	M	A
Query Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	A	P	N	I	L	N	V	S	F	.	.	.	.	.	.	.	.	.	.	.	.	N	Y	V	E	G	E	S	L	I	M	A	L	K	D	L	A	V	S	S	G	S	A	L	E	P	S	Y	V	L	R	A	L	G	L	N	D	E	L	A	H	S	S	I	R	F	S	L	G	R	F	T	T	E	E
Template Known Secondary structure		.	.	.	.	.		T	T							.	.	.	.	.	.	.	.	.	.	.	.	T	T	S									T	T	T				B														T	T								T								T	T
Template Predicted Secondary structure		.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
							297	.	.	300	.	.	.	.	.													.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
		551	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	Q	Q	L	V	A	L	L	V	R	F	E	K	L	L	E	S	D	A	P	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	I	D	Y	T	I	E	L	V	R	K	S	I	G	R	L	R	D	L	S	P	L
Template Known Secondary structure																			T	T
Template Predicted Secondary structure
Template SS confidence
		365	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions