Job Description P24169 Confidence 99.82% Date Thu Jan 5 11:40:44 GMT 2012 Rank 74 Aligned Residues 309 % Identity 12% Template c3kaxB_ PDB info PDB header:lyase Chain: B: PDB Molecule:aminotransferase, classes i and ii; PDBTitle: crystal structure of a putative c-s lyase from bacillus anthracis Resolution 1.70 Å

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		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190								.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																									.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.
Query Sequence		D	L	L	I	H	E	G	A	P	C	I	A	Q	Q	H	A	A	K	V	F	N	A	D	.	.	.	.	.	.	.	K	T	Y	F	V	L	N	G	T	S	S	S	N	K	V	V	L	N	A	L	L	T	P	G	D	L	V	L	F	D	R	N	N	H	K	S	N	H	H	G	A	L	L	Q	A	G	A	T	P	V
Query Conservation																									.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.																																									.
Template Conservation																																																																								.
Template Sequence		P	I	F	G	Y	T	L	P	P	E	N	I	G	D	I	I	C	N	W	T	K	K	Q	Y	N	W	D	I	Q	K	E	W	I	V	F	S	A	G	I	V	P	A	L	S	T	S	I	Q	A	F	T	K	E	N	E	S	V	L	V	Q	P	P	I	Y	P	P	F	F	E	X	.	V	T	T	N	N	R	Q	L	C
Template Known Secondary structure											T	T																			G	G	G					S																T	T							S	S									.				T	T
Template Predicted Secondary structure																																																																								.
Template SS confidence
		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.		.	.	.	.	.	.	.	.				300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure																																																					.									.	.	.
Query SS confidence																																																					.									.	.	.
Query Sequence		Y	L	E	T	A	R	N	P	Y	G	F	I	G	G	I	D	A	H	C	F	E	E	S	Y	L	R	E	L	I	A	E	V	A	P	Q	R	A	K	E	A	R	P	F	R	L	A	V	I	Q	L	G	.	T	Y	D	G	T	I	Y	N	.	.	.	A	R	Q	V	V	D	K	I	G	H	L	C	D	Y	I	L	F
Query Conservation																																																					.									.	.	.
Alig confidence													.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.							.									.	.	.
Template Conservation													.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.
Template Sequence		V	S	P	L	Q	K	Q	N	D	T	Y	.	.	.	.	.	.	.	A	I	D	F	E	H	L	E	K	Q	F	Q	Q	G	V	K	L	.	.	.	.	.	.	.	.	.	.	X	L	L	C	S	P	H	N	P	I	G	R	V	W	K	K	E	E	L	T	K	L	G	S	L	C	T	K	Y	N	V	I	V	V	A
Template Known Secondary structure						B		S	S	S	S		.	.	.	.	.	.	.	B												T	T				.	.	.	.	.	.	.	.	.	.					S	S	B	T	T	T	T	B																	T	T
Template Predicted Secondary structure													.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.								.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.											160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.			.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure																																											.	.
Query SS confidence																																											.	.
Query Sequence		D	S	A	W	V	G	Y	E	Q	F	I	P	M	M	A	D	C	S	P	L	L	L	D	L	N	E	N	D	P	G	I	L	V	T	Q	S	V	H	K	Q	Q	.	.	A	G	F	S	Q	T	S	Q	I	H	K	K	D	S	H	I	K	G	Q	Q	R	Y	V	P	H	K	R	M	N	N	A	F	M	M	H	A	S
Query Conservation																																											.	.
Alig confidence							.							.	.																												.	.														.	.	.	.	.	.	.	.	.
Template Conservation							.							.	.																																											.	.	.	.	.	.	.	.	.
Template Sequence		D	E	I	H	S	.	D	I	I	Y	A	D	.	.	H	T	H	T	P	F	A	S	L	S	E	E	L	A	A	R	T	I	T	C	X	A	P	S	K	T	F	N	I	A	G	L	Q	A	S	I	I	I	I	P	N	E	.	.	.	.	.	.	.	.	.	K	L	R	Q	A	F	T	S	I	Q	Y	R	Q	G	F
Template Known Secondary structure				T	T	T	.	T		B		T	T	.	.						G	G	G	S						T	T							S	S	T	G	G	G		G	G	G											.	.	.	.	.	.	.	.	.													T	T
Template Predicted Secondary structure							.							.	.																																											.	.	.	.	.	.	.	.	.
Template SS confidence
		195	.	.	.	.		200	.	.	.	.	.			.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.										.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
		395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	S	P	F	Y	P	L	F	A	A	L	N	I	N	A	K	M	H	E	G	V	S	G	R	N	M	W	M	D	C	V	V	N	G	I	N	A	R	K	L	I	L	D	N	C	Q	H	I	R	P	F	V	P	E	L	V	D	G	K	P	W	Q	S	Y	E	T	A	Q	I	A	V	D	L	R	F	F	Q	F	V	P
Query Conservation
Alig confidence																							.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	G	L	N	I	F	A	Y	T	A	X	Q	S	A	Y	T	E	C	N	D	W	.	L	N	E	I	R	F	Y	I	E	D	N	A	K	F	A	C	E	Y	I	K	D	H	I	P	T	L	S	V	X	K	P	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																T	T	S					.																								T	T							S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																							.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.		.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
		475	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.		.	.	.	.	.	530	.	.							.	.	.	.	.	.	.	540	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.									.	.	.	.	.	.
Query SS confidence																																																				.									.	.	.	.	.	.
Query Sequence		G	E	H	W	H	S	F	E	G	Y	A	E	N	Q	Y	F	V	D	P	C	K	L	L	L	T	T	P	G	I	D	A	R	N	G	E	Y	E	A	F	G	V	P	A	T	I	L	A	N	F	L	.	R	E	N	G	V	V	P	E	.	.	.	.	.	.	K	C	D	L	N	S	I	L	F	L	L	T	P	A	E
Query Conservation																																																				.									.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.																	.									.	.	.	.	.	.										.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.																																									.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S	F	L	L	W	I	.	.	.	.	.	.	.	.	.	.	D	C	S	A	L	N	L	S	Q	D	E	R	T	K	L	L	E	E	K	G	K	I	I	V	E	P	G	E	K	Y	G	L	G	G	E	E	H	I	G	I	.	.	N	I	G	C
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B	S	S					.	.	.	.	.	.	.	.	.	.			G	G	G															S							S	G	G	G		T	T	T	T	T					.	.			S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.																																									.	.
Template SS confidence
																			316	.	.	.	320	.	.											.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.			.	.	.	.
		548	.	550	.	.	.	.	.	.	.	.	.	560	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	M	A	K	L	Q	Q	L	V	A	L	L	V	R	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	R	S	V	L	E	E	I	L	N	R	L	R	H	T
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		367	.	.	370	.	.	.	.	.	.	.	.	.	380	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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