Job Description P24169 Confidence 87.41% Date Thu Jan 5 11:40:44 GMT 2012 Rank 245 Aligned Residues 52 % Identity 21% Template c3k8kB_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:alpha-amylase, susg; PDBTitle: crystal structure of susg Resolution 2.20 Å

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		236	.	.	.	240	.	.	.	.			.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure											.	.
Query SS confidence											.	.
Query Sequence		G	A	T	P	V	Y	L	E	T	.	.	A	R	N	P	Y	G	F	I	G	G	I	D	A	H	C	F	E	E	S	Y	L	R	E	L	I	A	E	V	A	P	Q	R	A	K	E	A	R	P	F	R	L	A	V	I	Q	L	G	T	Y	D	G	T	I	Y	N	A	R	Q	V	V	D	K	I	G	H	L	C	D	Y
Query Conservation											.	.
Alig confidence											.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	V	K	A	L	W	L	S	P	I	H	P	C	X	S	Y	H	G	Y	D	V	T	D	Y	T	K	V	N	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	L	G	T	E	S	D	F	D	R	L	V	T	E	A	H	N	R	G	I	K
Template Known Secondary structure		T		S								S		B	S	S	T	T			S	B	S		T	T	S			T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T																T	T
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.																															.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		314	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	F	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	Y	L	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		146	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions