Job Description P24169 Confidence 100.00% Date Thu Jan 5 11:40:44 GMT 2012 Rank 14 Aligned Residues 322 % Identity 17% Template c3h7fB_ PDB info PDB header:transferase Chain: B: PDB Molecule:serine hydroxymethyltransferase 1; PDBTitle: crystal structure of serine hydroxymethyltransferase from2 mycobacterium tuberculosis Resolution 1.50 Å

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		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.		.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure																																																				.								.
Query SS confidence																																																				.								.
Query Sequence		C	I	A	Q	Q	H	A	A	K	V	F	N	A	D	K	T	Y	F	V	L	N	G	T	S	S	S	N	K	V	V	L	N	A	L	L	T	P	G	D	L	V	L	F	D	R	N	N	H	K	S	.	N	H	H	G	A	L	L	.	Q	A	G	A	T	P	V	Y	L	E	T	A	R	N	P	Y	G	F	I	G	G
Query Conservation																																																				.								.
Alig confidence																																																				.								.																				.	.
Template Conservation																																																																																.	.
Template Sequence		N	L	A	R	D	R	A	K	A	L	F	G	A	E	F	A	N	V	Q	P	H	S	G	A	Q	A	N	A	A	V	L	H	A	L	M	S	P	G	E	R	L	L	G	L	D	L	A	N	G	G	H	L	T	H	G	M	R	L	N	F	S	G	K	L	Y	E	N	G	F	Y	G	V	D	P	A	T	H	L	.	.
Template Known Secondary structure													T		S							S	S															T	T								G	G	G	T			G	G	G	T		T	T	S					S	S									T	T	T		S	.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	D	A	H	C	F	E	E	S	Y	L	R	E	L	I	A	E	V	A	P	Q	R	A	K	E	A	R	P	F	R	L	A	V	I	Q	L	G	T	Y	D	G	T	I	Y	N	A	R	Q	V	V	D	K	I	G	H	L	C	D	Y	I	L	F	D	S	A	W	V	G	Y	E	Q	F	I	P	M	M	A	D	C	S
Query Conservation
Alig confidence		.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.
Template Conservation		.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.
Template Sequence		.	.	.	.	.	I	D	M	D	A	V	R	A	T	A	L	E	F	R	P	K	.	.	.	.	.	.	.	.	.	.	V	I	I	A	G	W	S	A	Y	P	R	V	L	D	F	A	A	F	R	S	I	A	D	E	V	G	A	K	L	L	V	D	M	A	H	F	A	G	L	V	A	A	.	.	.	.	G	L	H
Template Known Secondary structure		.	.	.	.	.																S	.	.	.	.	.	.	.	.	.	.							S	S			S															T								T	T	T						T	.	.	.	.	T	S	S
Template Predicted Secondary structure		.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.
Template SS confidence
							151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.											.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.					.	210	.
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	L	L	D	L	N	E	N	D	P	G	I	L	V	T	Q	S	V	H	K	Q	Q	A	G	F	S	Q	T	S	Q	I	H	K	K	D	S	H	I	K	G	Q	Q	R	Y	V	P	H	K	R	M	N	N	A	F	M	M	H	A	S	T	S	P	F	Y	P	L	F	A	A	L	N	I	N	A	K	M	H	E	G
Query Conservation
Alig confidence								.			.	.	.	.													.	.											.	.	.	.	.	.	.	.	.
Template Conservation								.			.	.	.	.													.	.											.	.	.	.	.	.	.	.	.
Template Sequence		P	S	P	V	P	H	.	A	D	.	.	.	.	V	V	S	T	T	V	H	T	L	G	G	G	.	.	R	S	G	L	I	V	G	K	Q	Q	.	.	.	.	.	.	.	.	.	Y	A	K	A	I	N	S	A	V	F	P	G	Q	Q	G	G	P	L	M	H	V	I	A	G	K	A	V	A	L	K	I	A	A	T
Template Known Secondary structure				S	T	T	T	.		S	.	.	.	.													.	.	S								G	G	.	.	.	.	.	.	.	.	.	G									T	T	T	T		S	S																	T	S
Template Predicted Secondary structure								.			.	.	.	.													.	.											.	.	.	.	.	.	.	.	.
Template SS confidence
		212	.	.	.	.	.		.	.					220	.	.	.	.	.	.	.	.	.	230	.			.	.	.	.	.	.	.	.	240	.										.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
		415	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	G	R	N	M	W	M	D	C	V	V	N	G	I	N	A	R	K	L	I	L	D	N	C	Q	H	I	R	P	F	V	P	E	L	V	D	G	K	P	W	Q	S	Y	E	T	A	Q	I	A	V	D	L	R	F	F	Q	F	V	P	G	E	H	W	H	S	F	E	G	Y	A	E	N	Q	Y	F	V	D	P	C
Query Conservation
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	E	F	A	D	R	Q	R	R	T	L	S	G	A	R	I	I	A	D	R	L	M	A	P	D	V	A	K	A	G	V	S	V	V	S	G	G	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	V	H
Template Known Secondary structure																							S	S						T	T				G	G	G	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.																																								.	.	.
		495	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.										.	.	.	.	.	.	.	.	540	.	.						.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.												.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.												.	.	.	.	.
Query Sequence		K	L	L	L	T	T	P	G	I	D	A	R	N	G	E	Y	E	A	F	G	V	P	A	T	I	L	A	N	F	L	R	E	N	G	V	V	P	.	.	.	.	.	.	.	.	.	E	K	C	D	L	N	S	I	L	F	L	.	.	.	.	.	L	T	P	A	E	D	M	A	K	L	Q	Q	L	V	A	L	L	V
Query Conservation																																							.	.	.	.	.	.	.	.	.												.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.												.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.
Template Sequence		L	V	L	V	D	L	.	.	.	.	.	.	.	.	.	.	R	D	S	P	L	D	G	Q	A	A	E	D	L	L	H	E	V	G	I	T	V	N	R	N	A	V	P	N	D	P	R	P	P	M	V	T	S	G	L	R	I	G	T	P	A	L	A	T	R	G	F	G	D	T	E	F	T	E	V	A	D	I	I	A
Template Known Secondary structure								.	.	.	.	.	.	.	.	.	.	T	T	S	S													T	T									T	T		S	S		T	T	T		S													T
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		318	.	320	.	.	.											.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
		561	.	.	.	.	.	.			.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.
Predicted Secondary structure									.	.
Query SS confidence									.	.
Query Sequence		R	F	E	K	L	L	E	.	.	S	D	A	P	L	A	E	V	L	P	S	I	Y	K	Q	H	E
Query Conservation									.	.
Alig confidence									.	.
Template Conservation
Template Sequence		T	A	L	A	T	G	S	S	V	D	V	S	A	L	K	D	R	A	T	R	L	A	R	A	F	P
Template Known Secondary structure						S	G	G	G																	S
Template Predicted Secondary structure
Template SS confidence
		388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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