|   |
180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | |
|
. | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | |
. | . | . | . | . | . | 230 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
. | . | . | . | 240 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
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|
|
|  | . | . |  |  |  |  |  |  |  |  |  |
|
|
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|
|  |  |  |  |  |
|
|  | . |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
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|
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| . |
. |
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| . |
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| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
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|
|
Query Sequence |   |
Q | Q | H | A | A | K | V | F | N | A | D | K | T | Y | F | V | L | N | G | T | S | S | . |
. |
S | N | K | V | V | L | N | A | L | L | T | P | G | D | L | V | L | F | D | R | N | N | . |
H | K | S | N | H | H | G | A | L | L | Q | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | A | T | P | V | Y | L | E | T | A | R |
Query Conservation |   |
|   |
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|   |   |
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|   |   |
|   |
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|   | . | . |
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|   |
|   |
|   |
|   |   |   |   |
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|   |
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|   |
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| . |
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|   |   |
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|   |
|
| . | . | . | . | . | . | . | . | . | . |
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|   |
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|   |
|   |   |
Alig confidence |   |
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| . | . |
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| . |
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| . |
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| . | . | . | . | . | . | . | . | . | . |
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|
Template Conservation |   |
|   |   |
|
|   |
|   |
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|   |
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|
|   |   |   |
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|   |
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|   |   |   |
|   |
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|   |
|
|   |   |   |   |   |   |
|   |
|   |   |   |   | . |
|
|   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |   |
|
|   |   |   |
Template Sequence |   |
E | R | V | Y | A | S | V | F | K | T | E | A | A | L | V | R | P | Q | I | I | S | G | T | H | A | I | S | T | V | L | F | G | I | L | R | P | G | D | E | L | L | Y | I | T | G | E | P | Y | D | T | L | E | E | I | . |
V | G | I | R | S | E | G | Q | G | S | L | K | D | F | Q | I | G | Y | D | A | V | P | L | L | P |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T |
| S |  |  |  |  |  | T | T | S |
| S |  |  |  |  |  |  |  |  |  |  |  |  |
|
| T | T |
|  |  |  |  |
| S | S | S |
|
| T | T |  |  |  |  | . |  | T | S | S |
| S | S | S |
|
| T | G | G | G | T |
|  |  |  |  |
|
|
|
| T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
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|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |
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|
|  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
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  |   |
64 | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | |
. | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . |
  |
  |   |
247 | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | |
|
|
|
|
. | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | |
|
. | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
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|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |
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|
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|
|  |  |  |  |  |
|
|
|  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . |
|  |  |  |  |  |
|
|
Query SS confidence |   |
|
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|
|
| . |
. |
. |
. |
. |
|
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|
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|
|
|
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|
|
| . |
. |
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|
|
Query Sequence |   |
N | P | Y | G | F | I | G | G | I | D | A | H | C | F | E | E | S | Y | L | R | E | L | I | A | E | V | A | P | Q | R | A | K | E | A | R | P | F | R | L | A | V | I | Q | L | G | T | Y | D | . |
. |
. |
. |
. |
G | T | I | Y | N | A | R | Q | V | V | D | K | I | G | H | L | C | . |
. |
D | Y | I | L | F | D | S | A |
Query Conservation |   |
  |   |   |
|   |
|
|   |
|   |   |   |   |
|
|   |
|   |
|   |   |   |
|   |   |   |
|   |
|
|
|   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|   | . | . | . | . | . |
|
|   |   |
|
|   |   |
|
|   |   |   |
|   |   |   | . | . |   |   |
|
|
|
|
|
|
Alig confidence |   |
|
| . | . | . | . | . | . | . | . | . | . |
|
|
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|
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|
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|
| . | . | . | . | . | . | . | . | . | . |
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|
| . | . | . | . | . |
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|
|
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|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   | . | . | . | . | . | . | . | . | . | . |   |   |
|
|
|   |
|   |   |
|
|   |   |   |
| . | . | . | . | . | . | . | . | . | . |
|   |
|   |
|
|   |   |   |   |
|   |   |
|
|   |   |   |
|   |
|
|   |
|
|
|   |
|
|
|   |   |
|   |   |   |
|
|   |
|
|
|   |
Template Sequence |   |
N | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
E | I | D | Y | P | A | V | S | K | K | I | S | A | N | T | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
K | X | I | G | I | Q | R | S | R | G | Y | A | D | R | P | S | F | T | I | E | K | I | K | E | X | V | T | F | V | K | N | I | N | P | N | I | I | V | F | V | D | N | C |
Template Known Secondary structure |   |
T | S | . | . | . | . | . | . | . | . | . | . | S |
|
|  |  |  |  |  |  |  |
|
| T | T |  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |
| S |
| T | T | S | S | S |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T | S |  |  |  |  |  |
| T |
Template Predicted Secondary structure |   |
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |
|
|
|
|
|
|
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|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
  |   |
143 | . | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . |
  |
  |   |
320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | |
. | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | |
|
. | . | . | . | . | . | 390 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|  |  |  |  |  |  |
|
|
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|
|
|
|
| . |
|  |  |  |  |  |  |  |
|
|
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|
|
|
|
|
|
|
|
|
|  |  | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
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|
|
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|
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| . |
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|
|
|
|
| . |
. |
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|
|
Query Sequence |   |
W | V | G | Y | E | Q | F | I | P | M | M | A | D | C | S | P | L | L | L | D | L | N | E | N | D | P | G | I | L | V | T | Q | S | V | H | K | Q | Q | A | G | F | . |
S | Q | T | S | Q | I | H | K | K | D | S | H | I | K | G | Q | Q | R | Y | V | P | H | K | . |
. |
R | M | N | N | A | F | M | M | H | A | S | T | S |
Query Conservation |   |
|
|
|
|   |   |
|
|
|   |   |   |   |   |   |   |   |
|
|   |   |
|
|
|   |   |   |
|
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|
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|
| . |
|
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|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |   | . | . |
|
|   |   |
|
|   |
|   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
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|
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|
|
| . | . | . | . |
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| . |
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|
| . | . | . | . | . | . | . |
|
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|
|
|
|
| . | . |
|
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|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|   | . | . | . | . | . | . | . | . |   |
|   |
|
|   |   |
|
|
| . | . | . | . |
|
|   |
|
|
|   |
|   |   |
|
|   |
|   |   |
|
|   |
|
| . | . | . | . | . | . | . |
|   |
|
|
|
|
|   |   |
|   |
|
|
|
|
|
|   |
|   |   |   |
|   |
Template Sequence |   |
Y | G | E | F | V | E | . |
. |
. |
. |
. |
. |
. |
. |
R | I | E | P | T | E | V | G | A | D | . |
. |
. |
. |
I | I | A | G | S | L | I | N | P | G | G | G | L | A | K | T | G | G | Y | I | A | . |
. |
. |
. |
. |
. |
. |
G | R | N | T | L | V | D | L | C | G | Y | R | L | T | T | P | G | I | G | R | E | A | G | A |
Template Known Secondary structure |   |
T | T | T | T | T | S | . | . | . | . | . | . | . | . | S |
|
| G | G | G | T | T |
| S | . | . | . | . |  |  |  |  |  |
|
|
| T | T | T | T | T |
|
| S |
|  |  |  |  | . | . | . | . | . | . | . |  |
|  |  |  |  |  |  |  |  |  |  |  | S |
| T | T | T | G | G | G |
|
|
|
Template Predicted Secondary structure |   |
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|  |  |  |
|
|
|  | . | . | . | . |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  | . | . | . | . | . | . | . |  |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
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|
|
|
|
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|
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|
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|
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|
|
|
  |   |
203 | . | . | . | . | . | |
|
|
|
|
|
|
|
. | 210 | . | . | . | . | . | . | . | . | |
|
|
|
. | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . |
  |
  |   |
397 | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
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|
|
|
|
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|
|
Query Sequence |   |
P | F | Y | P | L | F | A | A | L | N | I | N | A | K | M | H | E | G | V | S | G | R | N | M | W | M | D | C | V | V | N | G | I | N | A | R | K |
Query Conservation |   |
|
|
|
|
|
|
|
|
|
|   |
|
|   |   |
|   |   |
|   |
|   |   |
|   |   |   |   |
|   |   |
|   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |
|
|   | . | . |   |   |
|
|   |   |   |   |   |
|
|
|   |
|   |   |   |
|   |   |
|   |   |
Template Sequence |   |
S | L | Y | S | L | L | E | X | Y | Q | G | F | . |
. |
F | L | A | P | H | V | T | A | Q | A | I | K | G | A | R | F | T | A | A | X | L | A | E |
Template Known Secondary structure |   |
| T | T |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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265 | . | . | . | . | 270 | . | . | . | . | . | . | |
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. | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . |
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