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Job DescriptionP24169
Confidence99.31%DateThu Jan 5 11:40:44 GMT 2012
Rank223Aligned Residues374
% Identity12%Templatec3eleB_
PDB info PDB header:transferaseChain: B: PDB Molecule:amino transferase; PDBTitle: crystal structure of amino transferase (rer070207001803) from2 eubacterium rectale at 2.10 a resolution
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   101........110.........120.........130 .........140.........150.........160.........170.........
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Query Sequence  SHYETQLRPPFFRALVDYVNQGNSAFDCPG. HQGGEFFRRHPAGNQFVEYFGEALFRADLCNADVAMGDLLIHEGAPCIA
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Template Sequence  SXYQLGSVRSAIRELFEYGKKRAAIVGKENVYDFSIGNPSIPAPQIVNDTIKELVTDYDSV. ALHGYTSAQGDVETRAAI
Template Known Secondary structure  S


GGG







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   6...10.........20.........30.........40.........50.........60...... ...70.........80....
 
   180.........190 .........200.........210.. .......220.........230.........240.........250.....
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Query Sequence  QQHAAKVFNAD. . . KTYFVLNGTSSSNKVVLNALLT. PGDLVLFDRNNHKSNHHGALLQAGATPVYLETARNPYGFIGGI
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Template Sequence  AEFLNNTHGTHFNADNLYXTXGAAASLSICFRALTSDAYDEFITIAPYFPEYKV. FVNAAGARLVEVPADTEHFQI. . . .
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GGGSS

STT
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TT.TT



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   85....90.........100.........110.........120.........130........ .140.........150.........
 
   256...260.........270.........280.........290. ........ 300.........310. ........320.....
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Query Sequence  DAHCFEESYLRELIAEVAPQRAKEARPFRLAVIQLG. TYDGTIYN. . . ARQVVDKIGHLC. . . . . . DYILFDSAWVGYEQ
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Template Sequence  . . . . . DFDALEERINAHTRG. . . . . . . . . . VIINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYR. EIV
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T

TT..........
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TTT




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TTT.T
B
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   160.........170.... .....180.........190.........200.........210.........220 ...
 
   326...330.........340.........350........ .360.........370.........380.........390.........400....
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Query Sequence  FIPMMADCSPLLLDLNENDPGILVTQSVHKQQA. GFSQTSQIHKKDSHIKGQQRYVPHKRMNNAFMMHASTSPFYPLFAA
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Template Sequence  YDG. . IKVPFVTKYYDNT. . . . LVCYSYSKSLSLPGERIGYVLVPDE. . . . . . . . . VYDKAELYAAVCGAGRALGYVCAP
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GGGT
SS....STTTSS
GGG



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   224.. ...230......... 240.........250.........260.... .....270.........280........
 
   405....410.........420.........430.........440.........450.........460.........470.........480....
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Query Sequence  LNINAKMHEGVSGRNMWMDCVVNGINARKLILDNCQHIRPFVPELVDGKPWQSYETAQIAVDLRFFQFVPGEHWHSFEGY
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Template Sequence  SLFQKXIVKCQGATGDINAYKENRDLLYEGLTRI. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GYHCF
Template Known Secondary structure  TT
TT



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   289290.........300.........310.........320.. .....
 
   485....490.........500.........510.........520.........530......... 540.........550.........560..
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Query Sequence  AENQYFVDPCKLLLTTPGIDARNGEYEAFGVPATILANFLRENGVVPEKCDLNSI. . LFLLTPAEDMAKLQQLVALLVRF
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Template Sequence  KPDGAFY. . . . XFVKAL. . . . . . . . . . . . EDDSNAFCEKAKEEDVLIVAADGFGCPGWVRISYCVDREXIKHSXPAFEKI
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SBSS....
S............SS
TT
GGGGT
TT

S
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   328.330.... .....340 .........350.........360.........370.........380.........390.
 
   563.....
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Query Sequence  EKLLES
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Template Sequence  YKKYNK
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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