Job Description P24169 Confidence 99.74% Date Thu Jan 5 11:40:44 GMT 2012 Rank 115 Aligned Residues 357 % Identity 10% Template c3eibB_ PDB info PDB header:transferase Chain: B: PDB Molecule:ll-diaminopimelate aminotransferase; PDBTitle: crystal structure of k270n variant of ll-diaminopimelate2 aminotransferase from arabidopsis thaliana Resolution 1.85 Å

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		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure																																																											.
Query SS confidence																																																											.
Query Sequence		G	E	F	F	R	R	H	P	A	G	N	Q	F	V	E	Y	F	G	E	A	L	F	R	A	D	L	C	N	A	D	V	A	M	G	D	L	L	I	H	E	G	A	P	C	I	A	Q	Q	H	A	A	K	V	F	N	A	D	.	K	T	Y	F	V	L	N	G	T	S	S	S	N	K	V	V	L	N	A	L	L	T
Query Conservation																																																											.
Alig confidence																																																											.															.
Template Conservation																																																																										.
Template Sequence		G	I	G	D	T	T	E	P	I	P	E	V	I	T	S	A	M	A	K	K	A	H	E	L	S	T	I	E	G	Y	S	G	Y	G	A	E	Q	G	A	K	P	L	R	A	A	I	A	K	T	F	Y	G	G	L	G	I	G	D	D	D	V	F	V	S	D	G	A	K	C	D	I	S	.	R	L	Q	V	M	F	G
Template Known Secondary structure		S	S					S																	T	T	S	T	T	T				S			T	T															T	T	T	T			G	G	G					S								.
Template Predicted Secondary structure																																																																										.
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	D	L	V	L	F	D	R	N	N	H	K	S	N	H	H	G	A	L	L	Q	A	G	A	T	P	V	Y	L	E	T	A	R	N	P	Y	G	F	I	G	G	I	D	A	H	C	F	E	E	S	Y	L	R	E	L	I	A	E	V	A	P	Q	R	A	K	E	A	R	P	F	R	L	A	V	I	Q	L	G	T
Query Conservation
Alig confidence																			.																.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.																.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	N	V	T	I	A	V	Q	D	P	S	Y	P	A	Y	V	D	.	S	S	V	I	M	G	Q	T	G	Q	F	N	T	D	V	.	.	.	.	.	.	.	.	.	.	.	Q	K	Y	G	N	I	E	Y	M	R	C	T	P	E	N	G	F	F	P	D	L	S	T	V	G	R	T	D	I	I	F	F	C	S	P	N
Template Known Secondary structure		T	T								S			T					.					T	T		S					T	T	T	.	.	.	.	.	.	.	.	.	.	.	T			T	T								T	T	T	T	T				G	G	G					S						S	S
Template Predicted Secondary structure																			.																.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.		.	.	160	.	.	.	.	.	.	.	.	.	170	.	.												.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
		293	.	.	.	.					.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.		.	360	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.																																																														.
Query SS confidence							.	.	.	.																																																														.
Query Sequence		Y	D	G	T	I	.	.	.	.	Y	N	A	R	Q	V	V	D	K	I	G	H	L	C	D	Y	I	L	F	D	S	A	W	V	G	Y	E	Q	F	I	P	M	M	A	D	C	S	P	L	L	L	D	L	N	E	N	D	P	G	I	L	V	T	Q	S	V	H	K	Q	Q	A	.	G	F	S	Q	T	S	Q	I	H
Query Conservation							.	.	.	.																																																														.
Alig confidence							.	.	.	.																									.						.	.	.	.																												.
Template Conservation																																			.						.	.	.	.
Template Sequence		N	P	T	G	A	A	A	T	R	E	Q	L	T	Q	L	V	E	F	A	K	K	N	G	S	I	I	V	Y	D	S	A	Y	A	.	M	Y	M	S	D	.	.	.	.	D	N	P	R	S	I	F	E	I	P	G	A	E	E	V	A	M	E	T	A	S	F	S	N	Y	A	G	F	T	G	V	R	L	G	W	T	V
Template Known Secondary structure		T	T	T																				T								T	T	G	.	G	G			S	.	.	.	.	S			S	S	G	G	G	S	T	T	G	G	G	T							S					S	T	T	T	T
Template Predicted Secondary structure																																			.						.	.	.	.
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.		.	.	.	.	.					.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
		368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K	D	S	H	I	K	G	Q	Q	R	Y	V	P	H	K	R	M	N	N	A	F	M	M	H	A	S	T	S	P	F	Y	P	L	F	A	A	L	N	I	N	A	K	M	H	E	G	V	S	G	R	N	M	W	M	D	C	V	V	N	G	I	N	A	R	K	L	I	L	D	N	C	Q	H	I	R	P	F	V	P
Query Conservation
Alig confidence													.																																					.																							.	.	.	.	.	.	.	.	.
Template Conservation													.																																					.																							.	.	.	.	.	.	.	.	.
Template Sequence		I	P	K	K	L	L	Y	S	D	G	F	.	P	V	A	K	D	F	N	R	I	I	C	T	C	F	N	G	A	S	N	I	S	Q	A	G	A	L	A	C	L	T	P	E	G	L	E	A	.	M	H	K	V	I	G	F	Y	K	E	N	T	N	I	I	I	D	T	F	T	S	L	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				T	T		B		T	T	S		.	B																S												S	S							.																						T	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure													.																																					.																							.	.	.	.	.	.	.	.	.
Template SS confidence
		284	.	.	.	.	.	290	.	.	.	.		.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330		.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
		448	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	V	D	G	K	P	W	Q	S	Y	E	T	A	Q	I	A	V	D	L	R	F	F	Q	F	V	P	G	E	H	W	H	S	F	E	G	Y	A	E	N	Q	Y	F	V	D	P	C	K	L	L	L	T	T	P	G	I	D	A	R	N	G	E	Y	E	A	F	G	V	P	A	T	I	L	A	N	F	L	R	E	N
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.								.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.								.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Y	D	V	Y	G	G	K	N	A	P	Y	.	.	.	.	V	W	V	H	F	P	N	.	.	.	.	.	.	.	.	.	.	.	Q	S	S	W	D	V	F	A	E	I	L	E	K	T
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T							S	S	S	S		.	.	.	.						T	T	.	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.								.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																		353	.	.	.	.	.	.	360	.	.	.	.					.	.	.	.	.	370	.												.	.	.	.	.	.	.	.	380	.	.	.	.	.
		528	.	530	.	.	.	.	.	.	.	.	.	540					.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.
Query SS confidence															.	.	.	.
Query Sequence		G	V	V	P	E	K	C	D	L	N	S	I	L	.	.	.	.	F	L	L	T	P	A	E	D	M	A	K	L	Q	Q	L	V	A	L	L	V	R	F	E	K	L	L
Query Conservation															.	.	.	.
Alig confidence															.	.	.	.
Template Conservation
Template Sequence		H	V	V	T	T	P	G	S	G	F	G	P	G	G	E	G	F	V	R	V	S	A	F	G	H	R	E	N	I	L	E	A	C	R	R	F	K	Q	L	Y	K	H	H
Template Known Secondary structure								G	G	G	G		G	G	G	T	T								S																	T	T	T
Template Predicted Secondary structure
Template SS confidence
		386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.