Job Description P24169 Confidence 99.67% Date Thu Jan 5 11:40:44 GMT 2012 Rank 147 Aligned Residues 225 % Identity 11% Template c3e6gA_ PDB info PDB header:lyase Chain: A: PDB Molecule:cystathionine gamma-lyase-like protein; PDBTitle: crystal structure of xometc, a cystathionine c-lyase-like2 protein from xanthomonas oryzae pv.oryzae Resolution 2.80 Å

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		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	C	I	A	Q	Q	H	A	A	K	V	F	N	A	D	K	T	Y	F	V	L	N	G	T	S	S	S	N	K	V	V	L	N	A	L	L	T	P	G	D	L	V	L	F	D	R	N	N	H	K	S	N	H	H	G	A	L	L	Q	A	G	A	T	P	V	Y	L	E	T	A	R	N	P	Y	G	F	I	G	G	I
Query Conservation
Alig confidence																									.					.																										.																	.	.	.	.	.	.	.	.	.
Template Conservation																									.					.																										.																	.	.	.	.	.	.	.	.	.
Template Sequence		R	F	A	Y	E	R	C	V	A	A	L	E	G	G	T	R	A	F	A	F	A	S	G	.	M	A	A	T	.	S	T	V	M	E	L	L	D	A	G	S	H	V	V	A	M	D	D	L	Y	G	G	T	F	R	.	L	F	E	R	V	R	R	R	T	A	G	L	D	F	S	F	.	.	.	.	.	.	.	.	.
Template Known Secondary structure														T		S						S	S		.					.					T	T	S		T	T							S	S								.																	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																									.					.																										.																	.	.	.	.	.	.	.	.	.
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.		.	90	.	.		.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.		.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.		.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		D	A	H	C	F	E	E	S	Y	L	R	E	L	I	A	E	V	A	P	Q	R	A	K	E	A	R	P	F	R	L	A	V	I	Q	L	G	.	T	Y	D	G	T	I	Y	N	A	R	Q	V	V	D	K	I	G	H	L	C	D	Y	I	L	F	D	S	A	W	V	G	Y	E	Q	F	I	P	M	M	A	D	C	S
Query Conservation																																						.
Alig confidence		.																				.	.	.	.	.	.	.	.	.	.							.																																						.	.	.	.	.	.
Template Conservation		.																				.	.	.	.	.	.	.	.	.	.																																													.	.	.	.	.	.
Template Sequence		.	V	D	L	T	D	P	A	A	F	K	A	A	I	R	A	D	T	K	M	.	.	.	.	.	.	.	.	.	.	V	W	I	E	T	P	T	N	P	M	L	K	L	V	D	I	A	A	I	A	V	I	A	R	K	H	G	L	L	T	V	V	D	N	T	F	A	S	P	M	L	Q	R	P	.	.	.	.	.	.
Template Known Secondary structure		.			T	T											T	T				.	.	.	.	.	.	.	.	.	.					S	S		T	T	T																T	T								S	S	S		T	T	T			G	.	.	.	.	.	.
Template Predicted Secondary structure		.																				.	.	.	.	.	.	.	.	.	.																																													.	.	.	.	.	.
Template SS confidence
			134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.											.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	L	L	D	L	N	E	N	D	P	G	I	L	V	T	Q	S	V	H	K	Q	Q	A	G	F	S	Q	T	S	Q	I	H	K	K	D	S	H	I	K	G	Q	Q	R	Y	V	P	H	K	R	M	N	N	A	F	M	M	H	A	S	T	S	P	F	Y	P	L	F	A	A	L	N	I	N	A	K	M	H	E	G
Query Conservation
Alig confidence		.	.	.							.	.	.	.																								.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.							.	.	.	.																								.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	L	S	L	G	A	D	.	.	.	.	L	V	V	H	S	A	T	K	Y	L	N	G	H	S	D	M	V	G	G	I	A	V	V	.	.	.	.	.	.	.	.	.	G	D	N	A	E	L	A	E	Q	M	A	F	L	Q	N	S	I	G	G	V	Q	G	P	F	D	S	F	L	A	L	R	G	L	K	T
Template Known Secondary structure		.	.	.	G	G	G	T		S	.	.	.	.						T	T	T	T	T	T		S	S	S									.	.	.	.	.	.	.	.	.		S																		B														T	T
Template Predicted Secondary structure		.	.	.							.	.	.	.																								.	.	.	.	.	.	.	.	.
Template SS confidence
					197	.	.	200	.	.					.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.										.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		415	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	G	R	N	M	W	M	D	C	V	V	N	G	I	N	A	R	K	L	I	L	D	N	C	Q	H	I	R	P	F	V	P
Query Conservation
Alig confidence			.	.
Template Conservation			.	.
Template Sequence		L	.	.	P	L	R	M	R	A	H	C	E	N	A	L	A	L	A	Q	W	L	E	T	H	P	A	I	E	K	V	I	Y	P
Template Known Secondary structure			.	.																				T		T	T							T
Template Predicted Secondary structure			.	.
Template SS confidence
		261			.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions