Return to main results Retrieve Phyre Job Id

Job DescriptionP24169
Confidence60.09%DateThu Jan 5 11:40:44 GMT 2012
Rank339Aligned Residues33
% Identity18%Templatec3dmqA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:rna polymerase-associated protein rapa; PDBTitle: crystal structure of rapa, a swi2/snf2 protein that2 recycles rna polymerase during transcription
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   286...290.........300.........310.........320
Predicted Secondary structure 








Query SS confidence 


































Query Sequence  AVIQLGTYDGTIYNARQVVDKIGHLCDYILFDSAW
Query Conservation 







 

  

  

   
     






Alig confidence 



..




























Template Conservation   

 ..
   
         
    

 






Template Sequence  LVIC. . SLDFARRSKQRLEHLCEAEWDLLVVDEAH
Template Known Secondary structure  ..
TSTTTTTS




SS
Template Predicted Secondary structure  ..









Template SS confidence 


































   251... .....260.........270.........280...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions