Job Description P24169 Confidence 99.77% Date Thu Jan 5 11:40:44 GMT 2012 Rank 94 Aligned Residues 321 % Identity 15% Template c3b46B_ PDB info PDB header:transferase Chain: B: PDB Molecule:aminotransferase bna3; PDBTitle: crystal structure of bna3p, a putative kynurenine2 aminotransferase from saccharomyces cerevisiae Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		176	.	.	.	180	.	.	.	.	.	.	.	.								.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.
Query Sequence		P	C	I	A	Q	Q	H	A	A	K	V	F	N	.	.	.	.	.	.	.	A	D	K	T	Y	F	V	L	N	G	T	S	S	S	N	K	V	V	L	N	A	L	L	T	P	G	D	L	V	L	F	D	R	N	N	H	K	S	N	H	H	G	A	L	L	Q	A	G	A	T	P	V	Y	L	E	T	A	R	N	P
Query Conservation															.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.																																										.
Template Conservation																																																															.
Template Sequence		R	P	S	L	I	N	S	L	I	K	L	Y	S	P	I	Y	N	T	E	L	K	A	E	N	V	T	V	T	T	G	A	N	E	G	I	L	S	C	L	M	G	L	L	N	A	G	D	E	V	I	V	F	E	P	F	F	D	Q	Y	I	P	.	N	I	E	L	C	G	G	K	V	V	Y	V	P	I	N	P	P	K
Template Known Secondary structure																	T	T	S				G	G	G					S																T	T								S			T	T				.					T	T												T
Template Predicted Secondary structure																																																															.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		249	250	.	.	.	.	.	.	.	.	.			260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.					.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure													.	.																																				.	.	.	.
Query SS confidence													.	.																																				.	.	.	.
Query Sequence		Y	G	F	I	G	G	I	D	A	H	C	.	.	F	E	E	S	Y	L	R	E	L	I	A	E	V	A	P	Q	R	A	K	E	A	R	P	F	R	L	A	V	I	Q	L	G	T	Y	D	.	.	.	.	G	T	I	Y	N	A	R	Q	V	V	D	K	I	G	H	L	C	D	Y	I	L	F	D	S	A	W	V	G
Query Conservation													.	.																																				.	.	.	.
Alig confidence													.	.															.	.	.	.	.	.	.	.	.	.												.	.	.	.																											.
Template Conservation																													.	.	.	.	.	.	.	.	.	.																																										.
Template Sequence		E	L	D	Q	R	N	T	R	G	E	E	W	T	I	D	F	E	Q	F	E	K	A	I	T	S	K	T	.	.	.	.	.	.	.	.	.	.	K	A	V	I	I	N	T	P	H	N	P	I	G	K	V	F	T	R	E	E	L	T	T	L	G	N	I	C	V	K	H	N	V	V	I	I	S	D	E	V	Y	.	E
Template Known Secondary structure		T	T	T	T	S		B		G	G	G	S										T			T	T		.	.	.	.	.	.	.	.	.	.							S	S		T	T	T																				T								T	T	.	T
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.																																										.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.											200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240		.
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	E	Q	F	I	P	M	M	A	D	C	S	P	L	L	L	D	L	N	E	N	D	P	G	I	L	V	T	Q	S	V	H	K	Q	Q	A	G	F	S	Q	T	S	Q	I	H	K	K	D	S	H	I	K	G	Q	Q	R	Y	V	P	H	K	R	M	N	N	A	F	M	M	H	A	S	T	S	P	F	Y	P	L	F
Query Conservation
Alig confidence								.	.	.																																											.	.	.	.	.	.	.	.
Template Conservation								.	.	.																																											.	.	.	.	.	.	.	.
Template Sequence		H	L	Y	F	T	D	.	.	.	S	F	T	R	I	A	T	L	S	P	E	I	G	Q	L	T	L	T	V	G	S	A	G	S	F	A	A	T	G	W	R	I	G	W	V	L	S	L	N	A	E	L	.	.	.	.	.	.	.	.	L	S	Y	A	A	K	A	H	T	R	I	C	F	A	S	P	S	P	L	Q	E
Template Known Secondary structure		T		B		S	S	.	.	.					G	G	G	S						T	T											S		T	T	S								S					.	.	.	.	.	.	.	.												T	S	S
Template Predicted Secondary structure								.	.	.																																											.	.	.	.	.	.	.	.
Template SS confidence
		242	.	.	.	.	.				.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.									290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
		403	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	L	N	I	N	A	K	M	H	E	G	V	S	G	R	N	M	W	M	D	C	V	V	N	G	I	N	A	R	K	L	I	L	D	N	C	Q	H	I	R	P	F	V	P	E	L	V	D	G	K	P	W	Q	S	Y	E	T	A	Q	I	A	V	D	L	R	F	F	Q	F	V	P	G	E	H	W	H	S	F	E
Query Conservation
Alig confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	C	A	N	S	I	N	D	A	L	K	I	G	Y	F	E	K	M	R	Q	E	Y	I	N	K	F	K	I	F	T	S	I	F	D	E	L	G	L	P	Y	T	A	P	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure														T																								T							S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
		483	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.						.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.										540	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.																																.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.																																.	.	.	.	.	.	.	.	.
Query Sequence		G	Y	A	E	N	Q	Y	F	V	D	P	C	K	L	L	L	T	T	P	G	I	D	A	R	N	G	.	.	.	.	.	E	Y	E	A	F	G	V	P	A	T	I	L	A	N	F	L	R	E	N	G	V	V	P	E	K	C	D	L	N	S	I	.	.	.	.	.	.	.	.	.	L	F	L	L	T	P	A	E	D
Query Conservation																												.	.	.	.	.																																.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																		.	.	.	.	.																																.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	G	T	Y	F	V	L	V	D	F	S	K	V	K	I	P	E	D	Y	P	Y	P	E	E	I	L	N	K	G	K	D	F	R	I	S	H	W	L	I	N	E	L	G	V	V	A	I	P	P	T	E	F	Y	I	K	E	H	E	K	A	A	E	N	L	L	R	F	A	V	C	K	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	B	S	S							T	T	S				T	T					G	G	G	T	S	S																			B		G	G	G	G	S		G	G	G	G	G	G	G	T	T								S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Template SS confidence
											356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.
		549	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	K	L	Q	Q	L	V	A	L	L	V	R	F	E	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	A	Y	L	E	N	A	V	E	R	L	K	L	L	K	D
Template Known Secondary structure													G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		427	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions