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Job DescriptionP24169
Confidence99.69%DateThu Jan 5 11:40:44 GMT 2012
Rank140Aligned Residues310
% Identity17%Templatec2zc0C_
PDB info PDB header:transferaseChain: C: PDB Molecule:alanine glyoxylate transaminase; PDBTitle: crystal structure of an archaeal alanine:glyoxylate aminotransferase
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   170.........180........ .190.........200.........210.........220.........230.........240..
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Query Sequence  LIHEGAPCIAQQHAAKVFN. . . . . . . ADKTYFVLNGTSSSNKVVLNALLTPGDLVLFDRNNHKSNHHGALLQAGATPVYL
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Template Sequence  YTPANGIPELREELAAFLKKYDHLEVSPENIVITIGGTGALDLLGRVLIDPGDVVITENPSYINTLL. AFEQLGAKIEGV
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TT

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   71........80.........90.........100.........110.........120.........130....... ..140.........
 
   243......250.........260.........270.........280.........290....... ..300.........310........
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Query Sequence  ETARNPYGFIGGIDAHCFEESYLRELIAEVAPQRAKEARPFRLAVIQLGTYDGTI. . . . YNARQVVDKIGHLCDYILFDS
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Template Sequence  PVD. . . . . . . . . . . NDGMRVDLLEEKIKELKAKGQ. . . KVKLIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDT
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   150.. .......160.........170... ......180.........190.........200.........210.....
 
   319320.........330.........340.........350.........360.........370.........380.........390........
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Query Sequence  AWVGYEQFIPMMADCSPLLLDLNENDPGILVTQSVHKQQAGFSQTSQIHKKDSHIKGQQRYVPHKRMNNAFMMHASTSPF
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Template Sequence  AYN. FMRY. . . . EGGDIVPLKALDNEGRVIVAGTLSKVLGTGFRIGWII. . . . . . . . . . . . AEGEILKKVLMQKQPIDFC
Template Known Secondary structure  TTT.T
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   216.. .220.. .......230.........240.........250......... 260.........270........
 
   399400.........410.........420.........430.........440.........450.........460.........470........
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Query Sequence  YPLFAALNINAKMHEGVSGRNMWMDCVVNGINARKLILDNCQHIRPFVPELVDGKPWQSYETAQIAVDLRFFQFVPGEHW
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Template Sequence  APAISQYIALEYLKRGYFEKYHLEGALLGYKEKRDIMLKA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  S
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   279280.........290.........300.........310........
 
   479480.........490..... ....500.........510.........520.... .....530. ........540......
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Query Sequence  HSFEGYAENQYFVDPCK. . . LLLTTPGIDARNGEYEAFGVPATILANFL. RENGVVP. . . . . . . . EKCDLNSILFLLTPA
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Template Sequence  . . LENHLPNAEFTKPIAGMFVMFFLPE. . . . . . . . . . . GADGISFANELMEREGVVVVPGKPFYTDESGKNAIRLNFS. R
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   319320.........330.........340... ......350.........360.........370.........380... .
 
   547..550.........560.....
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Query Sequence  EDMAKLQQLVALLVRFEKL
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Template Sequence  PSKEEIPIGIKKLAKLYKE
Template Known Secondary structure  S
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   385....390.........400...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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