Job Description P24169 Confidence 99.90% Date Thu Jan 5 11:40:44 GMT 2012 Rank 36 Aligned Residues 295 % Identity 15% Template c2po3B_ PDB info PDB header:transferase Chain: B: PDB Molecule:4-dehydrase; PDBTitle: crystal structure analysis of desi in the presence of its2 tdp-sugar product Resolution 2.10 Å

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		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	C	I	A	Q	Q	H	A	A	K	V	F	N	A	D	K	T	Y	F	V	L	N	G	T	S	S	S	N	K	V	V	L	N	A	L	L	T	P	G	D	L	V	L	F	D	R	N	N	H	K	S	N	H	H	G	A	L	L	Q	A	G	A	T	P	V	Y	L	E	T	A	R	N	P	Y	G	F	I	G	G	I
Query Conservation
Alig confidence																			.																		.																			.																		.	.	.	.	.	.	.	.
Template Conservation																			.																		.																			.																		.	.	.	.	.	.	.	.
Template Sequence		V	R	E	F	E	E	R	V	A	G	L	A	G	V	R	H	A	.	V	A	T	C	N	A	T	A	G	L	Q	L	L	A	H	A	A	.	G	L	T	G	E	V	I	M	P	S	M	T	F	A	A	T	P	H	.	A	L	R	W	I	G	L	T	P	V	F	A	D	I	D	P	D	.	.	.	.	.	.	.	.
Template Known Secondary structure														T	S	S			.				S														.	T			S						S	S	S		T					.					T	T								B		T	T	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																			.																		.																			.																		.	.	.	.	.	.	.	.
Template SS confidence
		2054	.	.	.	.	.	2060	.	.	.	.	.	.	.	.	.	2070		.	.	.	.	.	.	.	.	.	2080	.	.	.	.	.	.	.		.	.	2090	.	.	.	.	.	.	.	.	.	2100	.	.	.	.	.		.	.	.	.	2110	.	.	.	.	.	.	.	.	.	2120	.	.
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	H	C	F	E	E	S	Y	L	R	E	L	I	A	E	V	A	P	Q	R	A	K	E	A	R	P	F	R	L	A	V	I	Q	L	G	T	Y	D	G	T	I	Y	N	A	R	Q	V	V	D	K	I	G	H	L	C	D	Y	I	L	F	D	S	A	W	V	G	Y	E	Q	F	I	P	M	M	A	D	C	S	P
Query Conservation
Alig confidence		.																	.	.	.	.	.	.	.	.	.	.											.	.																																	.	.	.	.	.	.	.
Template Conservation		.																	.	.	.	.	.	.	.	.	.	.											.	.																																	.	.	.	.	.	.	.
Template Sequence		.	T	G	N	L	D	P	D	Q	V	A	A	A	V	T	P	R	.	.	.	.	.	.	.	.	.	.	T	S	A	V	V	G	V	H	L	W	.	.	G	R	P	C	A	A	D	Q	L	R	K	V	A	D	E	H	G	L	R	L	Y	F	D	A	A	H	A	L	G	C	A	V	.	.	.	.	.	.	.	D	G
Template Known Secondary structure		.	T	S	S	B		S	T	T							T	T	.	.	.	.	.	.	.	.	.	.									G	G	.	.	G																T								T	T		T	T				.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure		.																	.	.	.	.	.	.	.	.	.	.											.	.																																	.	.	.	.	.	.	.
Template SS confidence
			2123	.	.	.	.	.	.	2130	.	.	.	.	.	.	.	.											.	2140	.	.	.	.	.	.	.	.			.	2150	.	.	.	.	.	.	.	.	.	2160	.	.	.	.	.	.	.	.	.	2170	.	.	.	.	.	.	.	.	.	2180								.	.
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.			.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.								.	.	.	.	.
Predicted Secondary structure																				.	.																																																	.	.	.	.	.	.	.
Query SS confidence																				.	.																																																	.	.	.	.	.	.	.
Query Sequence		L	L	L	D	L	N	E	N	D	P	G	I	L	V	T	Q	S	V	.	.	H	K	Q	Q	A	G	F	S	Q	T	S	Q	I	H	K	K	D	S	H	I	K	G	Q	Q	R	Y	V	P	H	K	R	M	N	N	A	F	M	M	H	A	S	T	S	P	F	Y	P	L	.	.	.	.	.	.	.	F	A	A	L	N
Query Conservation																				.	.																																																	.	.	.	.	.	.	.
Alig confidence										.	.	.	.							.	.																			.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Template Conservation										.	.	.	.																											.	.	.	.	.	.	.	.	.	.
Template Sequence		R	P	A	G	S	L	G	D	.	.	.	.	A	E	V	F	S	F	H	A	T	K	A	V	N	A	F	E	G	G	A	V	V	T	D	D	A	D	.	.	.	.	.	.	.	.	.	.	L	A	A	R	I	R	A	L	H	N	F	G	F	D	L	P	G	G	S	P	A	G	G	T	N	A	K	M	S	E	A	A
Template Known Secondary structure				T	T	S	S	S	S	.	.	.	.	S							T	T	S	S	S			S	S							S				.	.	.	.	.	.	.	.	.	.									T	B	T	T	T	T		T	T			T	T				B		B
Template Predicted Secondary structure										.	.	.	.																											.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2183	.	.	.	.	.	.	2190					.	.	.	.	.	.	.	.	.	2200	.	.	.	.	.	.	.	.	.	2210	.	.	.	.	.	.											.	.	.	2220	.	.	.	.	.	.	.	.	.	2230	.	.	.	.	.	.	.	.	.	2240	.	.	.	.	.	.	.	.
		407	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	N	A	K	M	H	E	G	V	S	G	R	N	M	W	M	D	C	V	V	N	G	I	N	A	R	K	L	I	L	D	N	C	Q	H	I	R	P	F	V	P	E	L	V	D	G	K	P	W	Q	S	Y	E	T	A	Q	I	A	V	D	L	R	F	F	Q	F	V	P	G	E	H	W	H	S	F	E	G	Y	A	E
Query Conservation
Alig confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	A	M	G	L	T	S	L	D	A	F	P	E	V	I	D	R	N	R	R	N	H	A	A	Y	R	E	H	L	A	D	L	P	G	V	L	V	A	D	H	D	R	H	G	L	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																														T		S		T	T						G	G	G	G	S	B		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2249	2250	.	.	.	.	.	.	.	.	.	2260	.	.	.	.	.	.	.	.	.	2270	.	.	.	.	.	.	.	.	.	2280	.	.	.	.	.	.	.	.	.	2290	.	.	.	.
		487	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.																										.	.	.	.	.	.	.	.	540	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	Q	Y	F	V	D	P	C	K	L	L	L	T	T	P	G	I	D	A	R	N	G	E	Y	E	A	F	G	V	P	A	T	I	L	A	N	F	L	R	E	N	G	V	V	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	K	C	D	L	N	S	I	L	F
Query Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.										.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.										.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	N	H	Q	Y	V	I	V	E	I	.	.	.	.	.	.	.	.	D	E	A	T	T	G	I	H	R	D	L	V	M	E	V	L	K	A	E	G	V	H	T	R	A	Y	F	S	P	G	C	H	E	L	E	P	Y	R	G	Q	P	H	A	P	L	P	H	T	E	R	L	A	A	R	V	L	S	L
Template Known Secondary structure		.	.	.	.	.										.	.	.	.	.	.	.	.						S	S												T	T				B		T	T		S		G	G	G	S	T	T	T	T	T	S													T	T
Template Predicted Secondary structure		.	.	.	.	.										.	.	.	.	.	.	.	.
Template SS confidence
							2295	.	.	.	.	2300	.	.	.									.	.	.	.	.	.	2310	.	.	.	.	.	.	.	.	.	2320	.	.	.	.	.	.	.	.	.	2330	.	.	.	.	.	.	.	.	.	2340	.	.	.	.	.	.	.	.	.	2350	.	.	.	.	.	.	.	.	.	2360	.
		542	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	T	P	A	E	D	M	A	K	L	Q	Q	L	V	A	L	L	V	R	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	T	G	T	A	I	G	D	D	D	I	R	R	V	A	D	L	L	R	L	C
Template Known Secondary structure				S	T	T
Template Predicted Secondary structure
Template SS confidence
		2362	.	.	.	.	.	.	.	2370	.	.	.	.	.	.	.	.	.	2380	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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