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Job DescriptionP24169
Confidence99.56%DateThu Jan 5 11:40:44 GMT 2012
Rank190Aligned Residues297
% Identity12%Templatec2pb2B_
PDB info PDB header:transferaseChain: B: PDB Molecule:acetylornithine/succinyldiaminopimelate aminotransferase; PDBTitle: structure of biosynthetic n-acetylornithine aminotransferase from2 salmonella typhimurium: studies on substrate specificity and3 inhibitor binding
Resolution1.91 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   172.......180.........190.........200...... ...210.........220.........230.........240...
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Query Sequence  HEGAPCIAQQHAAKVFNADKTYFVLNGTSSSNKVV. . . . . . . . LNALLTPGDLVLFDRNNHKSNHHGALLQAGATPVYLE
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Template Sequence  TNEPALRLGRKLIDATFAERVLFMNSGTEANETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFT. VSVGG. . . . . . Q
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   82.......90.........100.........110.........120.........130.........140........ .150... .
 
   244.....250.........260.........270.........280.........290.... .... .300.........310.......
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Query Sequence  TARNPYGFIGGIDAHCFEESYLRELIAEVAPQRAKEARPFRLAVIQLGTYD. . GTIY. . . . NARQVVDKIGHLCDYILFD
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Template Sequence  PKYSDGFGPKPADIIHVPFNDLHAVKAVMDDHTC. . . . . . . . AVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFD
Template Known Secondary structure  TTSSS

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   155....160.........170.........180........ .190.........200.........210.........220......
 
   318.320.........330.........340.........350.........360.........370.........380.........390.......
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Query Sequence  SAWVGYEQFIPMMADCSPLLLDLNENDPGILVTQSVHKQQAGFSQTSQIHKKDSHIKGQQRYVPHKRMNNAFMMHASTSP
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Template Sequence  EVQCGMGRTG. . . DLFAYMHYGVTPD. . . . ILTSA. . KALGGGFPVSAMLTTQ. . . . . . . . . . . . . . . . EIASAFSTYGG
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TTTTTTTTS...SSST


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..GGGTTTS


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   227..230...... ...240......... 250.... .....260.........270 .........280.
 
   398.400.........410.........420.........430.........440.........450.........460.........470.......
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Query Sequence  FYPLFAALNINAKMHEGVSGRNMWMDCVVNGINARKLILDNCQHIRPFVPELVDGKPWQSYETAQIAVDLRFFQFVPGEH
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Template Sequence  NPLACAVAGAAFDIIN. . . TPEVLQGIHTKRQQFVQHLQAIDEQ. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   288.290.........300... ......310.........320........
 
   478.480.........490.........500.........510.........520.........530.........540.........550.......
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Query Sequence  WHSFEGYAENQYFVDPCKLLLTTPGIDARNGEYEAFGVPATILANFLRENGVVPEKCDLNSILFLLTPAEDMAKLQQLVA
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Template Sequence  . . . . . . . . . . . . . . FDIFSDIRGMGLLIGAELKPKYKGRARDFLYAGAEAGVMVLNAGADVMRFAPSLVVEEADIHEGMQ
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TT
GGGTT
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   329330.........340.........350.........360.........370.........380.........390....
 
   558.560.
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Query Sequence  LLVR
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Template Sequence  RFAQ
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   395...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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