Job Description P24169 Confidence 99.88% Date Thu Jan 5 11:40:44 GMT 2012 Rank 46 Aligned Residues 295 % Identity 12% Template c2ogeC_ PDB info PDB header:transferase Chain: C: PDB Molecule:transaminase; PDBTitle: x-ray structure of s. venezuelae desv in its internal2 aldimine form Resolution 2.05 Å

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		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	C	I	A	Q	Q	H	A	A	K	V	F	N	A	D	K	T	Y	F	V	L	N	G	T	S	S	S	N	K	V	V	L	N	A	L	L	T	P	G	D	L	V	L	F	D	R	N	N	H	K	S	N	H	H	G	A	L	L	Q	A	G	A	T	P	V	Y	L	E	T	A	R	N	P	Y	G	F	I	G	G	I
Query Conservation
Alig confidence																																																								.																		.	.	.	.	.	.	.	.
Template Conservation																																																								.																		.	.	.	.	.	.	.	.
Template Sequence		L	E	G	F	E	A	E	F	A	A	Y	C	E	T	D	H	A	V	G	V	N	S	G	M	D	A	L	Q	L	A	L	R	G	L	G	I	G	P	G	D	E	V	I	V	P	S	H	T	Y	I	A	S	W	L	.	A	V	S	A	T	G	A	T	P	V	P	V	E	P	H	E	D	.	.	.	.	.	.	.	.
Template Known Secondary structure													T	T	S	S						S													T	T			T	T							S	S	S							.				T	T	T								B		S	S	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																								.																		.	.	.	.	.	.	.	.
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	H	C	F	E	E	S	Y	L	R	E	L	I	A	E	V	A	P	Q	R	A	K	E	A	R	P	F	R	L	A	V	I	Q	L	G	T	Y	D	G	T	I	Y	N	A	R	Q	V	V	D	K	I	G	H	L	C	D	Y	I	L	F	D	S	A	W	V	G	Y	E	Q	F	I	P	M	M	A	D	C	S	P
Query Conservation
Alig confidence		.																		.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.
Template Conservation		.																		.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.
Template Sequence		.	H	P	T	L	D	P	L	L	V	E	K	A	I	T	P	R	T	.	.	.	.	.	.	.	.	.	.	.	.	R	A	L	L	P	V	H	L	Y	G	H	P	A	D	M	D	A	L	R	E	L	A	D	R	H	G	L	H	I	V	E	D	A	A	Q	A	H	G	A	R	Y	R	G	.	.	.	.	.	R	R
Template Known Secondary structure		.	S	S	S	B						G	G	G			S	S		.	.	.	.	.	.	.	.	.	.	.	.						B		G	G	G															T	T								T	T		T	T				T	T	.	.	.	.	.
Template Predicted Secondary structure		.																		.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.
Template SS confidence
			116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.													.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.						.	.
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.										.	.	.	.	.	400	.	.	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.	.	.
Query Sequence		L	L	L	D	L	N	E	N	D	P	G	I	L	V	T	Q	S	V	H	K	Q	Q	A	G	F	S	Q	T	S	Q	I	H	K	K	D	S	H	I	K	G	Q	Q	R	Y	V	P	H	K	R	M	N	N	A	F	M	M	H	A	S	.	.	.	.	.	.	.	.	.	T	S	P	F	Y	P	L	F	A	A	L	N
Query Conservation																																																													.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	G	A	G	S	S	V	A	.	.	.	.	A	F	S	F	Y	P	G	N	L	G	C	F	G	D	G	G	A	V	V	T	.	.	.	.	.	.	.	.	.	.	.	.	G	D	P	E	L	A	E	R	L	R	M	L	R	N	Y	G	S	R	Q	K	Y	S	H	E	T	K	G	T	N	S	R	L	D	E	M	Q
Template Known Secondary structure		T	T		T	T				.	.	.	.												S	S								.	.	.	.	.	.	.	.	.	.	.	.	S												T	B	T	T		S	B	T	T	B		S	S				B
Template Predicted Secondary structure										.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		178	.	180	.	.	.	.	.					.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.													.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		407	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	N	A	K	M	H	E	G	V	S	G	R	N	M	W	M	D	C	V	V	N	G	I	N	A	R	K	L	I	L	D	N	C	Q	H	I	R	P	F	V	P	E	L	V	D	G	K	P	W	Q	S	Y	E	T	A	Q	I	A	V	D	L	R	F	F	Q	F	V	P	G	E	H	W	H	S	F	E	G	Y	A	E
Query Conservation
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	A	V	L	R	I	R	L	A	H	L	D	S	W	N	G	R	R	S	A	L	A	A	E	Y	L	S	G	L	A	G	L	P	G	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure											T																			T	T	T		T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
		487	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.																												.	.
Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	Q	Y	F	V	D	P	C	K	L	L	L	T	T	P	G	I	D	A	R	N	G	E	Y	E	A	F	G	V	P	A	T	I	L	A	N	F	L	R	E	N	G	V	V	P	E	K	C	D	L	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	I
Query Conservation																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	G	L	P	V	T	A	P	D	T	D	P	V	W	H	L	F	T	V	R	T	E	R	R	D	E	L	R	S	H	L	D	A	R	G	I	D	T	L	T	H	Y	P	V	P	V	H	L	S	P	A	Y	A	G	E	A	P	P	E	G	S	L	P	R	A	E	S	F	A	R	Q	V	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	B						T	T						S							T	T											T	T	B			B		S		S	S		G	G	G	S	G	G	G	T	T	T	S			T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.
Template SS confidence
										278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
		540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	L	L	T	P	A	E	D	M	A	K	L	Q	Q	L	V	A	L	L	V	R	F	E	K	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	L	P	I	G	P	H	L	E	R	P	Q	A	L	R	V	I	D	A	V	R	E	W	A	E	R	V
Template Known Secondary structure						S	T	T
Template Predicted Secondary structure
Template SS confidence
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions