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Job DescriptionP24169
Confidence99.65%DateThu Jan 5 11:40:44 GMT 2012
Rank164Aligned Residues305
% Identity18%Templatec2o1bA_
PDB info PDB header:transferaseChain: A: PDB Molecule:aminotransferase, class i; PDBTitle: structure of aminotransferase from staphylococcus aureus
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   170.........180........ .190.........200.........210.........220.........230.........240.
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Query Sequence  LIHEGAPCIAQQHAAKVFN. . . . . . . . ADKTYFVLNGTSSSNKVVLNALLTPGDLVLFDRNNHKSNHHGALLQAGATPVY
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Template Sequence  YGAFHGKEAFKQAIVDFYQRQYNVTLDKEDEVCILYGTKNGLVAVPTCVINPGDYVLLPDPGYTDYLA. GVLLADGKPVP
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   61........70.........80.........90.........100.........110.........120........ .130.........
 
   242.......250.........260.........270.........280.........290. ...... ..300.........310.......
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Query Sequence  LETARNPYGFIGGIDAHCFEESYLRELIAEVAPQRAKEARPFRLAVIQLG. TYDGTI. . . YNARQVVDKIGHLCDYILFD
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Template Sequence  LNLEPP. . . . . . . . . HYLPDWSKVDSQIIDKTKL. . . . . . . . . . IYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHD
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   140..... ....150.........160.... .....170.........180.........190.........200
 
   318.320.........330.........340.........350....... ..360.........370.........380.........390.....
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Query Sequence  SAWVGYEQFIPMMADCSPLLLDLNENDPGILVTQSVHKQQ. . AGFSQTSQIHKKDSHIKGQQRYVPHKRMNNAFMMHAST
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Template Sequence  FAYG. AFGFD. . . . AKNPSILASENGKDVAIEIYSLSKGYNXSGFRVGFAVGNKDX. . . . . . . . . . IQALKKYQTHTNAG
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GGGSTTSTTTTT
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   201... ..... 210.........220.........230.........240.........250. ........260.....
 
   396...400.........410.........420.........430.........440.........450.........460.........470.....
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Query Sequence  SPFYPLFAALNINAKMHEGVSGRNMWMDCVVNGINARKLILDNCQHIRPFVPELVDGKPWQSYETAQIAVDLRFFQFVPG
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Template Sequence  XFGALQDAAIYALNH. . . . . . YDDFLEEQSNVFKTRRDRFEAXLAK. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   266...270.........280 .........290.........300.....
 
   476...480.........490.........500.........510.........520.... .....530......... 540.........550
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Query Sequence  EHWHSFEGYAENQYFVDPCKLLLTTPGIDARNGEYEAFGVPATILANFL. RENGVVPEKCDLNSI. . . . LFLLTPAEDMA
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Template Sequence  . . . ADLPFVHAKGGIY. . . . VWLETPP. . . . . . . . . . . GYDSEQFEQFLVQEKSILVAPGKPFGENGNRYVRISLALDDQ
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BSS....

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SGGG
GGGTT

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   306...310........ .320..... ....330.........340.........350.........360.......
 
   551........560.......
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Query Sequence  KLQQLVALLVRFEKLLE
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Template Conservation   
  
   
      
 
Template Sequence  KLDEAAIRLTELAYLYE
Template Known Secondary structure  GGGGGG
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   368.370.........380....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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