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Job DescriptionP24169
Confidence99.65%DateThu Jan 5 11:40:44 GMT 2012
Rank163Aligned Residues307
% Identity13%Templatec2o0rA_
PDB info PDB header:transferaseChain: A: PDB Molecule:rv0858c (n-succinyldiaminopimelate aminotransferase); PDBTitle: the three-dimensional structure of n-succinyldiaminopimelate2 aminotransferase from mycobacterium tuberculosis
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   170.........180........ .190.........200.........210.........220.........230.........240.
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Query Sequence  LIHEGAPCIAQQHAAKVFN. . . . . . . . ADKTYFVLNGTSSSNKVVLNALLTPGDLVLFDRNNHKSNHHGALLQAGATPVY
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Template Sequence  YPPGPGSAPLRRAIAAQRRRHFGVDYDPETEVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSP. VVAMAGAHRVT
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   57..60.........70.........80.........90.........100.........110.........120.... .....130.....
 
   242.......250.........260.........270.........280.........290..... ....300.........310.......
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Query Sequence  LETARNPYGFIGGIDAHCFEESYLRELIAEVAPQRAKEARPFRLAVIQLGTYDG. . . . TIYNARQVVDKIGHLCDYILFD
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Template Sequence  VPLVPDGRGF. . . . . . . ALDADALRRAVTPRTRA. . . . . . . . . . LIINSPHNPTGAVLSATELAAIAEIAVAANLVVITD
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   136...140..... ....150.........160.. .......170.........180.........190........
 
   318.320.........330.........340.........350.........360.........370.........380.........390.......
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Query Sequence  SAWVGYEQFIPMMADCSPLLLDLNENDPGILVTQSVHKQQAGFSQTSQIHKKDSHIKGQQRYVPHKRMNNAFMMHASTSP
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Template Sequence  EVY. EHLVFD. . . HARHLPLAGFDGMAERTITISSAAMFNCTGWKIGWACGPAE. . . . . . . . . LIAGVRAAKQYLSYVGG
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TT.TT
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   199200. ...... ..210.........220.........230.........240........ .250.........260.....
 
   398.400.........410.........420.........430.........440.........450.........460.........470.......
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Query Sequence  FYPLFAALNINAKMHEGVSGRNMWMDCVVNGINARKLILDNCQHIRPFVPELVDGKPWQSYETAQIAVDLRFFQFVPGEH
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Template Sequence  APFQPAVALALDTEDAWV. . AALRNSLRARRDRLAAGLTEIG. . FAVHDSY. . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   267..270.........280.... .....290.........300...... ...310...
 
   478.480.........490.........500.........510.........520.........530......... 540.........550
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Query Sequence  WHSFEGYAENQYFVDPCKLLLTTPGIDARNGEYEAFGVPATILANFLRENGVVPEKCDLNSI. . . . . . . LFLLTPAEDMA
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Template Sequence  . . . . . . . . . . . . . . GTYFLCADPRPLG. . . . . . . . YDDSTEFCAALPEKVGVAAIPMSAFCDPADVWNHLVRFTFCKRDD
Template Known Secondary structure  ..............BSS
GGGT........


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   314.....320...... ...330.........340.........350.........360.........370.
 
   551........560..
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Query Sequence  KLQQLVALLVRF
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Template Sequence  TLDEAIRRLSVL
Template Known Secondary structure  GGG
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   380.........390.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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