Job Description P24169 Confidence 99.74% Date Thu Jan 5 11:40:44 GMT 2012 Rank 120 Aligned Residues 294 % Identity 14% Template c2nmpC_ PDB info PDB header:lyase Chain: C: PDB Molecule:cystathionine gamma-lyase; PDBTitle: crystal structure of human cystathionine gamma lyase Resolution 2.60 Å

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		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.					.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure																																																													.	.	.	.
Query SS confidence																																																													.	.	.	.
Query Sequence		P	C	I	A	Q	Q	H	A	A	K	V	F	N	A	D	K	T	Y	F	V	L	N	G	T	S	S	S	N	K	V	V	L	N	A	L	L	T	P	G	D	L	V	L	F	D	R	N	N	H	K	S	N	H	H	G	A	L	L	Q	.	.	.	.	A	G	A	T	P	V	Y	L	E	T	A	R	N	P	Y	G	F
Query Conservation																																																													.	.	.	.
Alig confidence																									.					.																										.					.	.	.	.												.	.	.	.	.	.
Template Conservation																									.					.																										.																				.	.	.	.	.	.
Template Sequence		R	N	C	L	E	K	A	V	A	A	L	D	G	A	K	Y	C	L	A	F	A	S	G	.	L	A	A	T	.	V	T	I	T	H	L	L	K	A	G	D	Q	I	I	C	M	D	D	V	Y	G	G	T	N	R	.	Y	F	R	Q	V	A	S	E	F	G	L	K	I	S	F	V	D	C	S	.	.	.	.	.	.
Template Known Secondary structure													T	T		S						S	S		.					.					T	T	S		T	T							S	S								.					T	G	G	G	T	T									S	.	.	.	.	.	.
Template Predicted Secondary structure																									.					.																										.																				.	.	.	.	.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90		.	.	.	.		.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.		.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.		.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.																					.
Query SS confidence																																										.																					.
Query Sequence		I	G	G	I	D	A	H	C	F	E	E	S	Y	L	R	E	L	I	A	E	V	A	P	Q	R	A	K	E	A	R	P	F	R	L	A	V	I	Q	L	G	.	T	Y	D	G	T	I	Y	N	A	R	Q	V	V	D	K	I	G	H	L	C	.	D	Y	I	L	F	D	S	A	W	V	G	Y	E	Q	F	I	P	M
Query Conservation																																										.																					.
Alig confidence		.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.										.																					.																		.
Template Conservation		.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.																																																	.
Template Sequence		.	.	.	.	.	.	.	.	.	K	I	K	L	L	E	A	A	I	T	P	E	.	.	.	.	.	.	.	.	.	.	T	K	L	V	W	I	E	T	P	T	N	P	T	Q	K	V	I	D	I	E	G	C	A	H	I	V	H	K	H	G	D	I	I	L	V	V	D	N	T	F	M	S	P	Y	F	Q	R	P	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	S										T	T	.	.	.	.	.	.	.	.	.	.								S	S		T	T	T														T	T	S	S	S								T	T	T							T	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.																																																	.
Template SS confidence
											139	140	.	.	.	.	.	.	.	.	.	150											.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.			.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.
Query SS confidence																														.	.
Query Sequence		M	A	D	C	S	P	L	L	L	D	L	N	E	N	D	P	G	I	L	V	T	Q	S	V	H	K	Q	Q	.	.	A	G	F	S	Q	T	S	Q	I	H	K	K	D	S	H	I	K	G	Q	Q	R	Y	V	P	H	K	R	M	N	N	A	F	M	M	H	A	S	T	S	P	F	Y	P	L	F	A	A	L	N	I
Query Conservation																														.	.
Alig confidence		.	.	.	.	.	.	.	.							.	.	.	.											.	.															.	.	.	.	.	.	.	.																	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.							.	.	.	.																											.	.	.	.	.	.	.	.																	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	L	A	L	G	A	D	.	.	.	.	I	S	M	Y	S	A	T	K	Y	M	N	G	H	S	D	V	V	M	G	L	V	S	V	N	C	E	.	.	.	.	.	.	.	.	S	L	H	N	R	L	R	F	L	Q	N	S	L	G	A	V	.	.	.	.	.	.	P	S	P	I	D	C
Template Known Secondary structure		.	.	.	.	.	.	.	.	T	T	T	T		S	.	.	.	.						T	T	T	T	T	T		S	S	S												.	.	.	.	.	.	.	.																	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.							.	.	.	.																											.	.	.	.	.	.	.	.																	.	.	.	.	.	.
Template SS confidence
										199	200	.	.	.	.					.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230									.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.							.	.	.	250	.	.
		408	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	K	M	H	E	G	V	S	G	R	N	M	W	M	D	C	V	V	N	G	I	N	A	R	K	L	I	L	D	N	C	Q	H	I	R	P	F	V	P	E	L	V	D	G	K	P	W	Q	S	Y	E	T	A	Q	I	A	V	D	L	R	F	F	Q	F	V	P	G	E	H	W	H	S	F	E	G	Y	A	E	N
Query Conservation
Alig confidence																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	L	C	N	R	G	L	K	T	L	H	V	R	M	E	K	H	F	K	N	G	M	A	V	A	Q	F	L	E	S	N	P	W	V	E	K	V	I	Y	P	G	L	P	S	H	P	Q	H	E	L	V	K	R	Q	C	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									T	T																					T		T	T							T	T	S	T	T	S	T	T									S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
		488	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.																												.	.	.	.	540
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	Y	F	V	D	P	C	K	L	L	L	T	T	P	G	I	D	A	R	N	G	E	Y	E	A	F	G	V	P	A	T	I	L	A	N	F	L	R	E	N	G	V	V	P	E	K	C	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	N	S	I	L
Query Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.															.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.															.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	C	T	G	M	V	T	F	Y	I	K	G	T	L	Q	.	.	.	.	.	.	.	.	.	.	H	A	E	I	F	L	K	N	L	K	L	F	T	L	A	E	S	L	G	G	F	E	S	L	A	E	L	P	A	I	M	T	H	A	S	V	L	K	N	D	R	D	V	L	G	I	S	D	T	L	I	R
Template Known Secondary structure		.	.	.	.			S							S	S				.	.	.	.	.	.	.	.	.	.										S	S	S				S			S	S	S	S						G	G	G	T	T	T	T	T	S									T			T	T
Template Predicted Secondary structure		.	.	.	.															.	.	.	.	.	.	.	.	.	.
Template SS confidence
						310	.	.	.	.	.	.	.	.	.	320	.	.	.											.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
		541	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	L	T	P	A	E	D	M	A	K	L	Q	Q	L	V	A	L	L	V	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	S	V	G	L	E	D	E	E	D	L	L	E	D	L	D	Q	A	L	K	A
Template Known Secondary structure						S	S
Template Predicted Secondary structure
Template SS confidence
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions