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Job DescriptionP24169
Confidence99.89%DateThu Jan 5 11:40:44 GMT 2012
Rank41Aligned Residues368
% Identity16%Templatec2jisA_
PDB info PDB header:lyaseChain: A: PDB Molecule:cysteine sulfinic acid decarboxylase; PDBTitle: human cysteine sulfinic acid decarboxylase (csad) in2 complex with plp.
Resolution1.6 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   111........120.........130... ......140.........150.........160.........170.........180.......
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Query Sequence  FFRALVDYVNQGNSAFDCPGHQG. . . GEFFRRHPAGNQFVEYFGEALFRADLCNADVAMGDLLIHEGAPCIAQQHAAKVF
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Template Sequence  ILERCRA. VIRYSVKTGHPRFFNQLFSGLDPHALAGRIITESLNTSQYTYEIAPVFVL. . . . . . . . . MEEEVLRKLRALV
Template Known Secondary structure  .S

TTSTTSSS







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   70...... ...80.........90.........100.........110.........120...... ...130.........
 
   188.190.. .......200.........210.. .......220.........230....... ..240.........
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Query Sequence  NADKT. YFVLNGTSSSNKVVLNALLT. . . . . . . . . . . . . . PGDLVLFDRNNHKSNHHGALLQAGA. . . TPVYLETARNPY
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Template Sequence  GWSSGDGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYSIQK. GAAFLGLGTDSVRVVKADERG.
Template Known Secondary structure  T
SS
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TTS
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B
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   140.........150.........160.........170.........180.........190...... ...200.........210.......
 
   250.........260.........270.........280.........290. ........300.........310.........320........
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Query Sequence  GFIGGIDAHCFEESYLRELIAEVAPQRAKEARPFRLAVIQLG. TYDGTIYNARQVVDKIGHLCDYILFDSAWVGYEQFIP
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Template Sequence  . . . . . . . . . KMVPEDLERQIGMA. . . . EAEGAVPFLVSATSGTTVLGAFDPLEAIADVCQRHGLWLHVDAAWGGSVLLSQ
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B
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B

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TTGGGGGG
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   218.220.........230. ........240.........250.........260.........270.........280....
 
   329330.........340.........350.........360.........370.........380.........390 ....
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Query Sequence  MMADCSPLLLDLNENDPGILVTQSVHKQQAGFSQTSQIHKKDSHIKGQQRYVPHKRMNNAFM. . . . . . . . . . . . . . MHAS
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Template Sequence  . . THRHLLDGIQRAD. . . . SVAWNPHKLLAAGLQCSALLLQDTS. . . . . . . . . . . NLLKRCHGSKFYDVALDTGDKVVQC
Template Known Secondary structure  ..TTGGGGTTGGG
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   285....290....... ..300.........310.........320.. .......330.........340.......
 
   395....400.........410.........420.........430.........440.........450.........460.........470....
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Query Sequence  TSPFYPLFAALNINAKMHEGVSGRNMWMDCVVNGINARKLILDNCQHIRPFVPELVDGKPWQSYETAQIAVDLRFFQFVP
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Template Sequence  GRRVDCL. . KLWLMWKAQGDQGLERRIDQAFVLARYLVEEMKKREGFELVMEP. . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  S



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   357..360... ......370.........380.........390.........400.......
 
   475....480.........490.........500.........510.. .......520.........530......... 540...
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Query Sequence  GEHWHSFEGYAENQYFVDPCKLLLTTPGIDARNGEYEA. . . . . . FGVPATILANFLRENGVVPEKCDLNSI. . . . . LFLL
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Template Sequence  . . . . . . . . . . . . . . . . . EFVNVCFWFVPPSLRGKQESPDYHERLSKVAPVLKERMVKEGSMMIGYQPHGTRGNFFRVVVA
Template Known Secondary structure  .................SSS

GGGTT
TTSTTTTS
TT

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   408.410.........420.........430.........440.........450.........460.........470
 
   544.....550.........560......
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Query Sequence  TPAEDMAKLQQLVALLVRFEKLL
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Template Sequence  NSALTCADMDFLLNELERLGQDL
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   471........480.........490...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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