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Job DescriptionP24169
Confidence99.82%DateThu Jan 5 11:40:44 GMT 2012
Rank75Aligned Residues296
% Identity12%Templatec2huuA_
PDB info PDB header:transferaseChain: A: PDB Molecule:alanine glyoxylate aminotransferase; PDBTitle: crystal structure of aedes aegypti alanine glyoxylate2 aminotransferase in complex with alanine
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   175....180.........190 .........200.........210.........220........ .230.........240.........250
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Query Sequence  APCIAQQHAAKVFNAD. . KTYFVLNGTSSSNKVVLNALLTPGDLVLFDRNNHKSNH. . HGALLQAGATPVYLETARNPYG
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Template Sequence  IMDDIKEGVRYLFQTNNIATFCLSASGHGGMEATLCNLLEDGDVILIGHTGHWGDRSAD. MATRYGADVRVVKSKVGQ. .
Template Known Secondary structure  T


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   53......60.........70.........80.........90.........100.........110. ........120.........
 
   251........260.........270.........280.........290.........300.........310.........320.........330
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Query Sequence  FIGGIDAHCFEESYLRELIAEVAPQRAKEARPFRLAVIQLGTYDGTIYNARQVVDKIGHLCDYILFDSAWVGYEQFIPMM
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Template Sequence  . . . . . . . . SLSLDEIRDALLIHKPSVL. . . . . . . . FLTQGDSSTGVLQGLEGVGALCHQHNCLLIVDTVASLGGAPMF. .
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TTTBTTB


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   130.........140........ .150.........160.........170.........180.........190.
 
   331........340.........350.........360.........370.........380.........390.
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Query Sequence  ADCSPLLLDLNENDPGILVTQSVHKQQAGFSQTSQIHKKDSHIKGQQRYVPHKRMNNAFMM. . . . . . . . . . . . . . . . . . .
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Template Sequence  . . . . . . . MDRWEI. . . . DAMYTGSQVLGAPPGITPVS. . . . . . . . . . . . FSHRAVERYKRRNTKVKVYYWDMSLVGDYWG
Template Known Secondary structure  .......TTTTT
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S
GGG
TT
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   192..... ..200.........210....... ..220.........230.........240........
 
   392.......400.........410.........420.........430.........440.........450.........460.....
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Query Sequence  . . . . . . HASTSPFYPLFAALNINAKMHEGVSGRNMWMDCVVNGINARKLILDNCQHIRPFVPELVDGKPWQSYETAQIAV
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Template Sequence  CFGRPRIYHHTISSTLLYGLREAIAMACEEGLPALIARHEDCAKRLYRGLQDAGFELYADPKDR. . . . . . . . . . . . . . . .
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SSS



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TT

BSS
GGGB................
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   250.........260.........270.........280.........290.........300.........310...
 
   466...470.........480.........490.........500.........510.........520..... ....530... ......540
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Query Sequence  DLRFFQFVPGEHWHSFEGYAENQYFVDPCKLLLTTPGIDARNGEYEAFGVPATILANFLR. ENGVVPEK. . . . CDLNSIL
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . LSTVTTIKVPQ. . . . . . . . . . . GVDWLKAAQYAMKTYLVEISGGLGPTAGQVFR
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TT

T...........T



B


GGGTTT
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   314.....320.... .....330.........340.........350......
 
   541 ........550.........560.......
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Query Sequence  F. LLTPAEDMAKLQQLVALLVRFEKLLE
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Template Sequence  IGLMGQNATTERVDRVLQVFQEAVAAVK
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GGG
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   357..360.........370.........380....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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