Job Description P24169 Confidence 99.49% Date Thu Jan 5 11:40:44 GMT 2012 Rank 201 Aligned Residues 293 % Identity 12% Template c2eh6A_ PDB info PDB header:transferase Chain: A: PDB Molecule:acetylornithine aminotransferase; PDBTitle: crystal structure of acetylornithine aminotransferase from aquifex2 aeolicus vf5 Resolution 1.90 Å

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		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210									.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.
Query Sequence		H	E	G	A	P	C	I	A	Q	Q	H	A	A	K	V	F	N	A	D	K	T	Y	F	V	L	N	G	T	S	S	S	N	K	V	V	L	N	A	L	.	.	.	.	.	.	.	.	L	T	P	G	D	L	V	L	F	D	R	N	N	H	K	S	N	H	H	G	A	L	L	Q	A	G	A	T	P	V	Y	L	E
Query Conservation																																									.	.	.	.	.	.	.	.
Alig confidence																																									.	.	.	.	.	.	.	.																				.								.	.	.	.	.	.
Template Conservation																																																																				.								.	.	.	.	.	.
Template Sequence		E	N	P	W	Q	E	E	L	A	H	K	L	V	K	H	F	W	T	E	G	K	V	F	F	A	N	S	G	T	E	S	V	E	A	A	I	K	L	A	R	K	Y	W	R	D	K	G	K	N	K	W	K	F	I	S	F	E	N	S	F	H	G	R	T	Y	G	.	S	L	S	A	T	G	Q	.	.	.	.	.	.
Template Known Secondary structure																T	S	S	S								S	S																			T	T										B	T					S	S			.						B		.	.	.	.	.	.
Template Predicted Secondary structure																																																																				.								.	.	.	.	.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.			.	.	.	.	.	.	.					.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.								.	.	.	.
Query SS confidence																																																		.	.								.	.	.	.
Query Sequence		T	A	R	N	P	Y	G	F	I	G	G	I	D	A	H	C	F	E	E	S	Y	L	R	E	L	I	A	E	V	A	P	Q	R	A	K	E	A	R	P	F	R	L	A	V	I	Q	L	G	.	.	T	Y	D	G	T	I	Y	.	.	.	.	N	A	R	Q	V	V	D	K	I	G	H	L	C	D	Y	I	L	F	D
Query Conservation																																																		.	.								.	.	.	.
Alig confidence																																				.	.	.	.	.	.	.	.							.	.								.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.
Template Sequence		P	K	F	H	K	G	F	E	P	L	V	P	G	F	S	Y	A	K	L	N	D	I	D	S	V	Y	K	L	L	D	E	E	T	A	.	.	.	.	.	.	.	.	G	I	I	I	E	V	I	Q	G	E	G	G	V	N	E	A	S	E	D	F	L	S	K	L	Q	E	I	C	K	E	K	D	V	L	L	I	I	D
Template Known Secondary structure		G	G	G	T	T	T	T		S			S	S						T	T							T	T			T	T			.	.	.	.	.	.	.	.						S			T	T	T	T	S																			T
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.									.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	W	V	G	Y	E	Q	F	I	P	M	M	A	D	C	S	P	L	L	L	D	L	N	E	N	D	P	G	I	L	V	T	Q	S	V	H	K	Q	Q	A	G	F	S	Q	T	S	Q	I	H	K	K	D	S	H	I	K	G	Q	Q	R	Y	V	P	H	K	R	M	N	N	A	F	M	M	H	A	S	T	S	P
Query Conservation
Alig confidence												.	.	.														.	.	.	.										.											.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.														.	.	.	.										.											.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	V	Q	T	G	I	G	R	T	G	.	.	.	E	F	Y	A	Y	Q	H	F	N	L	K	P	D	.	.	.	.	V	I	A	L	A	K	G	L	G	.	G	G	V	P	I	G	A	I	L	A	.	.	.	.	.	.	.	.	.	.	.	.	R	E	E	V	A	Q	S	F	T	P	G	S	H	G	S	T	F	G
Template Known Secondary structure			T	T	T	T	T	T	T	T	S	.	.	.	S	S	S	G	G	G	G	G	T				S	.	.	.	.						G	G	G	G	.	T	T	S								.	.	.	.	.	.	.	.	.	.	.	.						T	T			T	T	S				S	S	T
Template Predicted Secondary structure												.	.	.														.	.	.	.										.											.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		213	.	.	.	.	.	.	220	.	.				.	.	.	.	.	.	.	230	.	.	.	.	.					.	.	.	.	240	.	.	.	.		.	.	.	.	.	250	.	.	.	.													.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
		398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	Y	P	L	F	A	A	L	N	I	N	A	K	M	H	E	G	V	S	G	R	N	M	W	M	D	C	V	V	N	G	I	N	A	R	K	L	I	L	D	N	C	Q	H	I	R	P	F	V	P	E	L	V	D	G	K	P	W	Q	S	Y	E	T	A	Q	I	A	V	D	L	R	F	F	Q	F	V	P	G	E	H
Query Conservation
Alig confidence																	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	N	P	L	A	C	R	A	G	T	V	V	V	D	E	.	.	.	.	V	E	K	L	L	P	H	V	R	E	V	G	N	Y	F	K	E	K	L	K	E	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T															.	.	.	.																						T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.					.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
		478	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	H	S	F	E	G	Y	A	E	N	Q	Y	F	V	D	P	C	K	L	L	L	T	T	P	G	I	D	A	R	N	G	E	Y	E	A	F	G	V	P	A	T	I	L	A	N	F	L	R	E	N	G	V	V	P	E	K	C	D	L	N	S	I	L	F	L	L	T	P	A	E	D	M	A	K	L	Q	Q	L	V	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	K	G	K	V	K	G	R	G	L	M	L	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	E	L	E	R	E	C	K	D	Y	V	L	K	A	L	E	K	G	L	L	I	N	C	T	A	G	K	V	L	R	F	L	P	P	L	I	I	Q	K	E	H	I	D	R	A	I	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	S	S						T	T					.	.	.	.	.	.	.	.	.	.	.	.	.			S	S												T	T							T	T	T								T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
										311	.	.	.	.	.	.	.	.	320	.	.	.														.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
		558	.	560	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	V	R	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	L	R	E	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		370	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions