Return to main results Retrieve Phyre Job Id

Job DescriptionP24169
Confidence99.88%DateThu Jan 5 11:40:44 GMT 2012
Rank47Aligned Residues300
% Identity17%Templatec2c7tA_
PDB info PDB header:transferaseChain: A: PDB Molecule:glutamine-2-deoxy-scyllo-inosose PDBTitle: crystal structure of the plp-bound form of btrr,2 a dual functional aminotransferase involved in butirosin3 biosynthesis.
Resolution2.1 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   175....180.........190.........200.........210 .........220.........230.........240.........250...
Predicted Secondary structure 








.



















Query SS confidence 



































.










































Query Sequence  APCIAQQHAAKVFNADKTYFVLNGTSSSNKVVLNAL. LTPGDLVLFDRNNHKSNHHGALLQAGATPVYLETARNPYGFIG
Query Conservation   
 


 


  


  
 






 

 
 
 
 .   

 


 






  


 



 



 
     
 

Alig confidence 























.










.


















.
















......
Template Conservation      

  

   
    
   

.
 

  

  
 
  

 

           .     
     

    ......
Template Sequence  MERKFAKAFADFNGVPYCVPTTSG. STALMLALEALGIGEGDEVIVPSLTWIATAT. AVLNVNALPVFVDVEAD. . . . . .
Template Known Secondary structure  T
SS
.TT

TT
SSS
T.TT

B
TT......
Template Predicted Secondary structure 





.











.






......
Template SS confidence 















































































   43......50.........60...... ...70.........80.........90....... ..100.........110....
 
   254.....260.........270.........280.........290.........300.........310.........320.........330...
Predicted Secondary structure 
































Query SS confidence 















































































Query Sequence  GIDAHCFEESYLRELIAEVAPQRAKEARPFRLAVIQLGTYDGTIYNARQVVDKIGHLCDYILFDSAWVGYEQFIPMMADC
Query Conservation   
    

 
 
   
   
 


        







 

  

  

   
     









  


     
Alig confidence  ...
















............








































.......
Template Conservation  ...        
       
............         
   

  
  

   
  

 
 
 
 
   .......
Template Sequence  . . . TYCIDPQLIKSAITDKT. . . . . . . . . . . . KAIIPVHLFGSMANMDEINEIAQEHNLFVIEDCAQSHGSVW. . . . . . .
Template Known Secondary structure  ...T
SB


TT............

B

TT



T

TT
TT
.......
Template Predicted Secondary structure  ...








............



















.......
Template SS confidence 















































































   115....120.........130. ........140.........150.........160.........170..
 
   334.....340.........350.. .......360.........370.........380.........390......
Predicted Secondary structure 












..

























...............
Query SS confidence 


















. .











































. . . . . . . . . . . . . . .
Query Sequence  SPLLLDLNENDPGILVTQS. . VHKQQAGFSQTSQIHKKDSHIKGQQRYVPHKRMNNAFMMHASTS. . . . . . . . . . . . . . .
Query Conservation     

  


   





..











 


           

  

  

 
 



...............
Alig confidence 









....




..














.............















...............
Template Conservation            ....    
    
 
    

 
  .............    
          
               
Template Sequence  NNQRAGTIGD. . . . IGAFSCQQGKVLTAGEGGIIVT. . . . . . . . . . . . . KNPRLFELIQQLRADSRVYCDDSSELMHGDM
Template Known Secondary structure  TTTTSSSS....

TTSSS
SSS
.............S
BTT
S
TTS

TT
B
Template Predicted Secondary structure 







....











.............

















Template SS confidence 















































































   173......180.. .......190.........200.... .....210.........220.........230.....
 
   397..400.........410.........420.........430.........440.........450.........460.......
Predicted Secondary structure  .........






















Query SS confidence  . . . . . . . . .






































































Query Sequence  . . . . . . . . . PFYPLFAALNINAKMHEGVSGRNMWMDCVVNGINARKLILDNCQHIRPFVPELVDGKPWQSYETAQIAVDL
Query Conservation  .........









 

  
  
 
  
    
  
   
  
                                
Alig confidence  .........



























































...........
Template Conservation                     

     
  
          
  
   
    

               ...........
Template Sequence  QLVKKGDIQGSNYCLSEFQSAILLDQLQELDDKNAIREKNAMFLNDALSKIDGIKVMKRPPQVSRQTYY. . . . . . . . . . .
Template Known Secondary structure  S

SS


B



TTTTSTT



TT


S...........
Template Predicted Secondary structure 


























...........
Template SS confidence 















































































   236...240.........250.........260.........270.........280.........290.........300....
 
   468.470.........480.........490.........500.........510.........520.........530.
Predicted Secondary structure 












































................
Query SS confidence 































































. . . . . . . . . . . . . . . .
Query Sequence  RFFQFVPGEHWHSFEGYAENQYFVDPCKLLLTTPGIDARNGEYEAFGVPATILANFLRENGVVP. . . . . . . . . . . . . . . .
Query Conservation            



          

 

 
 
 
     
     



  
   
 
 

  ................
Alig confidence  ...........................








.......




















................
Template Conservation  ...........................         .......      
      
   
    
        
   
 
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . GYVFRFDPV. . . . . . . KFGGLNADQFCEILREKLNMGTFYLHPPYLPVHKNPL
Template Known Secondary structure  ...........................
GG.......GTTT

T

TTT




GGG
TT
Template Predicted Secondary structure  ...........................


.......















Template SS confidence 















































































   305....310... ......320.........330.........340.........350
 
   532.......540........ .550.........560......
Predicted Secondary structure  ............................








.
Query SS confidence  . . . . . . . . . . . . . . . . . . . . . . . . . . . .
















.

















Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . EKCDLNSILFLLTPAED. MAKLQQLVALLVRFEKLL
Query Conservation  ............................
 
    

 
 
 
 
.  
   
  

  
    
Alig confidence  ............................
















.

















Template Conservation                           
 
       
 

    

  
 
  
  

  
    
Template Sequence  FCPWTKNRYLKSVRKTEAYWRGLHYPVSERASGQSIVIHHAILLAEPSHLSLLVDAVAELARKF
Template Known Secondary structure 

GGG
TTS


T


TTSGGGGGS
Template Predicted Secondary structure 
































Template SS confidence 































































   351........360.........370.........380.........390.........400.........410....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions