Job Description P24169 Confidence 38.65% Date Thu Jan 5 11:40:44 GMT 2012 Rank 363 Aligned Residues 86 % Identity 9% Template c1r8jB_ PDB info PDB header:circadian clock protein Chain: B: PDB Molecule:kaia; PDBTitle: crystal structure of circadian clock protein kaia from2 synechococcus elongatus Resolution 2.03 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure																																				.
Query SS confidence																																				.
Query Sequence		C	F	T	T	Q	R	E	C	I	Y	I	N	E	S	R	N	I	D	V	A	A	I	V	L	S	L	N	D	V	T	C	G	K	L	.	D	E	I	D	A	T	G	Y	G	I	P	V	F	I	A	T	E	N	Q	E	R	V	P	A	E	Y	L	P	R	I	S	G	V	F	E	N	C	E	S	R	R	E	F	Y	G
Query Conservation																																				.
Alig confidence																																				.																								.	.	.	.	.
Template Conservation																																																												.	.	.	.	.
Template Sequence		V	C	E	S	G	E	M	L	L	E	Y	A	Q	T	H	R	D	Q	I	D	C	L	I	L	V	A	A	N	P	S	F	R	A	V	V	Q	Q	L	C	F	E	G	V	V	V	P	A	I	V	V	G	D	P	A	K	E	Q	L	.	.	.	.	.	Y	H	S	A	E	L	H	L	G	I	H	Q	L	E	Q	L	P
Template Known Secondary structure					S											S	T	T	S		S						T	T	S	T	T											T	T														S		S	.	.	.	.	.	S	B	T	T						T	T	S		T	T
Template Predicted Secondary structure																																																												.	.	.	.	.
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90						.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		94	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	L	E	T	A	A	S	H	Y	E	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	Q	V	D	A	A	L	A	E	F	L	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions