Job Description P24169 Confidence 99.75% Date Thu Jan 5 11:40:44 GMT 2012 Rank 104 Aligned Residues 217 % Identity 14% Template c1i41J_ PDB info PDB header:lyase Chain: J: PDB Molecule:cystathionine gamma-synthase; PDBTitle: cystathionine gamma-synthase in complex with the inhibitor2 appa Resolution 3.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.					.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure																																																													.	.	.	.
Query SS confidence																																																													.	.	.	.
Query Sequence		C	I	A	Q	Q	H	A	A	K	V	F	N	A	D	K	T	Y	F	V	L	N	G	T	S	S	S	N	K	V	V	L	N	A	L	L	T	P	G	D	L	V	L	F	D	R	N	N	H	K	S	N	H	H	G	A	L	L	Q	A	.	.	.	.	G	A	T	P	V	Y	L	E	T	A	R	N	P	Y	G	F	I
Query Conservation																																																													.	.	.	.
Alig confidence																								.																															.						.	.	.	.											.	.	.	.	.	.	.
Template Conservation																								.																															.																				.	.	.	.	.	.	.
Template Sequence		V	V	L	E	E	K	I	S	A	L	E	G	A	E	S	T	L	L	M	A	S	G	.	M	C	A	S	T	V	M	L	L	A	L	V	P	A	G	G	H	I	V	T	T	T	D	C	Y	R	K	T	R	I	.	F	I	E	T	I	L	P	K	M	G	I	T	A	T	V	I	D	P	A	.	.	.	.	.	.	.
Template Known Secondary structure													T		S						S	S		.												S		T	T							S	S								.					T	G	G	G	G	T								S	S	.	.	.	.	.	.	.
Template Predicted Secondary structure																								.																															.																				.	.	.	.	.	.	.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.		.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.		.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.		.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure																																									.
Query SS confidence																																									.
Query Sequence		G	G	I	D	A	H	C	F	E	E	S	Y	L	R	E	L	I	A	E	V	A	P	Q	R	A	K	E	A	R	P	F	R	L	A	V	I	Q	L	G	.	T	Y	D	G	T	I	Y	N	A	R	Q	V	V	D	K	I	G	H	L	C	D	Y	I	L	F	D	S	A	W	V	G	Y	E	Q	F	I	P	M	M	A
Query Conservation																																									.
Alig confidence		.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.										.																																						.	.	.
Template Conservation		.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.																																																.	.	.
Template Sequence		.	.	.	.	.	.	.	.	D	V	G	A	L	E	L	A	L	N	Q	K	K	.	.	.	.	.	.	.	.	.	V	N	L	F	F	T	E	S	P	T	N	P	F	L	R	C	V	D	I	E	L	V	S	K	L	C	H	E	K	G	A	L	V	C	I	D	G	T	F	A	T	P	L	N	Q	K	A	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.												S		.	.	.	.	.	.	.	.	.								S	S		T	T	T																T	T								T	T	T							T	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.																																																.	.	.
Template SS confidence
										188	.	190	.	.	.	.	.	.	.	.	.	200										.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.			.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.
Query SS confidence																																	.	.
Query Sequence		D	C	S	P	L	L	L	D	L	N	E	N	D	P	G	I	L	V	T	Q	S	V	H	K	Q	Q	A	G	F	S	Q	.	.	T	S	Q	I	H	K	K	D	S	H	I	K	G	Q	Q	R	Y	V	P	H	K	R	M	N	N	A	F	M	M	H	A	S	T	S	P	F	Y	P	L	F	A	A	L	N	I	N	A
Query Conservation																																	.	.
Alig confidence		.	.	.	.	.	.							.	.	.	.																.	.											.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.							.	.	.	.																												.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	L	A	L	G	A	D	.	.	.	.	L	V	L	H	S	A	T	K	F	L	G	G	H	N	D	V	L	A	G	C	I	S	G	P	L	K	L	.	.	.	.	.	.	.	.	.	V	S	E	I	R	N	L	H	H	I	L	G	G	A	L	N	P	N	A	A	Y	L	I	I	R	G	M	K
Template Known Secondary structure		.	.	.	.	.	.	T	T	T	T		S	.	.	.	.						T	T	T	T	T	T		S	S	S													.	.	.	.	.	.	.	.	.												T																T
Template Predicted Secondary structure		.	.	.	.	.	.							.	.	.	.																												.	.	.	.	.	.	.	.	.
Template SS confidence
								248	.	250	.	.	.					.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280										.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	M	H	E	G	V	S	G	R	N	M	W	M	D	C	V	V	N	G	I	N	A	R	K	L	I	L	D	N	C	Q	H	I	R	P	F	V	P
Query Conservation
Alig confidence							.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.
Template Sequence		T	L	H	L	R	.	.	.	.	.	.	V	Q	Q	Q	N	S	T	A	L	R	M	A	E	I	L	E	A	H	P	K	V	R	H	V	Y	Y	P
Template Known Secondary structure		T					.	.	.	.	.	.																			S	S							T
Template Predicted Secondary structure							.	.	.	.	.	.
Template SS confidence
		309	310	.	.	.							.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions