Job Description P0A901 Confidence 99.97% Date Thu Jan 5 11:09:03 GMT 2012 Rank 13 Aligned Residues 155 % Identity 22% Template d1z24a1 SCOP info Lipocalins Lipocalins Retinol binding protein-like Resolution 2.60

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	T	P	P	R	G	V	T	V	V	N	N	F	D	A	K	R	Y	L	G	T	W	Y	E	I	A	R	F	D	H	R	F	E	R	G	L	E	K	V	T	A	T	Y	S	L	R	D	D	G	G	L	N	V	I	N	K	G	Y	N	P	D	R	G	M	W	Q	Q	S	E	G	K	A	Y	F	T	G	A	P	T	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	G	Y	C	P	D	V	K	P	V	N	D	F	D	L	S	A	F	A	G	A	W	H	E	I	A	K	L	P	L	E	N	E	N	Q	G	K	C	T	I	A	E	Y	K	Y	D	G	K	K	A	S	V	Y	N	S	F	V	S	N	G	V	K	E	Y	M	E	G	D	L	E	I	A	P	D	A	K	Y	T	K	Q
Template Known Secondary structure			S	S								S	S																			G	G	G	T	T												S	S											T	T													T	T
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		102	.	.	.	.	.	.				.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.		.	.	.	.	.	130	.							.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.			.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.																	.								.	.	.	.	.	.																																.	.
Query SS confidence									.	.	.																	.								.	.	.	.	.	.																																.	.
Query Sequence		A	A	L	K	V	S	F	.	.	.	F	G	P	F	Y	G	G	Y	N	V	I	A	L	D	R	E	.	Y	R	H	A	L	V	C	.	.	.	.	.	.	G	P	D	R	D	Y	L	W	I	L	S	R	T	P	T	I	S	D	E	V	K	Q	E	M	L	A	V	A	T	R	E	.	.	G	F	D	V	S	K	F
Query Conservation									.	.	.																	.								.	.	.	.	.	.																																.	.
Alig confidence									.	.	.																	.								.	.	.	.	.	.																																.	.
Template Conservation
Template Sequence		G	K	Y	V	M	T	F	K	F	G	Q	R	V	V	N	L	V	P	W	V	L	A	T	D	Y	K	N	Y	A	I	N	Y	N	C	D	Y	H	P	D	K	K	A	H	S	I	H	A	W	I	L	S	K	S	K	V	L	E	G	N	T	K	E	V	V	D	N	V	L	K	T	F	S	H	L	I	D	A	S	K	F
Template Known Secondary structure		S	B								T	T														S	S	S											T	T	T	T											S	S	S	S			T												T	T	T	T	T			G	G	G
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	W	V	Q	Q	P	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	S	N	D	F	S	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions