Job Description P0A901 Confidence 99.88% Date Thu Jan 5 11:09:03 GMT 2012 Rank 34 Aligned Residues 150 % Identity 13% Template d1u17a1 SCOP info Lipocalins Lipocalins Retinol binding protein-like Resolution 1.70

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		25	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40			.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure				.															.	.
Query SS confidence				.															.	.
Query Sequence		P	R	.	G	V	T	V	V	N	N	F	D	A	K	R	Y	L	.	.	G	T	W	Y	E	I	A	R	F	D	H	R	F	E	R	G	L	E	K	V	T	A	T	Y	S	L	R	D	D	G	G	L	N	V	I	N	K	G	Y	N	P	D	R	G	M	W	Q	Q	S	E	G	K	A	Y	F	T	G	A	P	T	R
Query Conservation				.															.	.
Alig confidence				.															.	.
Template Conservation
Template Sequence		C	T	K	N	A	L	A	Q	T	G	F	N	K	D	K	Y	F	N	G	D	V	W	Y	V	T	D	Y	L	D	L	E	P	D	D	V	P	K	R	Y	C	A	A	L	A	A	G	T	A	S	G	K	L	K	E	A	L	Y	C	Y	D	P	K	T	Q	D	T	F	Y	D	V	S	E	L	Q	E	E	S	P	G	K
Template Known Secondary structure										T	T							T	S	S											S	S			S	S														T	T											T	T	T															T	T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		102	.	.	.	.	.												.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.						.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.
Query Sequence		A	A	L	K	V	S	.	.	.	.	.	.	.	.	.	.	.	F	F	G	P	F	Y	G	G	Y	N	V	I	A	L	D	R	E	Y	R	H	A	L	V	C	G	P	.	.	.	.	.	D	R	D	Y	L	W	I	L	S	R	T	P	T	I	S	D	E	V	K	Q	E	M	L	A	V	A	T	R	E	G	F	D
Query Conservation								.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.																		.	.
Template Conservation																																																																			.	.
Template Sequence		Y	T	A	N	F	K	K	V	E	K	N	G	N	V	K	V	D	V	T	S	G	N	Y	Y	T	F	T	V	M	Y	A	D	D	S	S	A	L	I	H	T	C	L	H	K	G	N	K	D	L	G	D	L	Y	A	V	L	N	R	N	K	D	T	N	A	G	.	.	D	K	V	K	G	A	V	T	A	A	S	L	K
Template Known Secondary structure											T	T	S								T	T												S	S										S	S	S	S											S	S	T	T					.	.										T	T
Template Predicted Secondary structure																																																																			.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.			.	.	150	.	.	.	.	.	.	.	.	.	160
		166	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	K	F	I	W	V	Q	Q	P	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	S	D	F	I	S	T	K	D	N	K
Template Known Secondary structure		G	G	G	S				T	T	S
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions