Job Description P0A901 Confidence 99.92% Date Thu Jan 5 11:09:03 GMT 2012 Rank 25 Aligned Residues 150 % Identity 16% Template d1pm1x_ SCOP info Lipocalins Lipocalins Retinol binding protein-like Resolution 1.10

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		25	.		.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure				.														.
Query SS confidence				.														.
Query Sequence		P	R	.	G	V	T	V	V	N	N	F	D	A	K	R	Y	.	L	G	T	W	Y	E	I	A	R	F	D	H	R	F	E	R	G	L	E	K	V	T	A	T	Y	S	L	R	D	D	G	G	L	N	V	I	N	K	G	Y	N	P	D	R	G	M	W	Q	Q	S	E	G	K	A	Y	F	T	G	A	P	T	R	A
Query Conservation				.														.
Alig confidence				.														.
Template Conservation
Template Sequence		C	S	T	N	I	S	P	K	Q	G	L	D	K	A	K	Y	F	S	G	K	W	Y	V	T	H	F	L	D	K	D	P	Q	V	T	D	Q	Y	C	S	S	F	T	P	R	E	S	D	G	T	V	K	E	A	L	Y	H	Y	N	A	N	K	K	T	S	F	Y	N	I	G	E	G	K	L	E	S	S	G	L	Q	Y
Template Known Secondary structure				S						S	S							S	S	S												T	T															T	T											T	T	T	T													S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		103	.	.	.												.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.						.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.
Query Sequence		A	L	K	V	.	.	.	.	.	.	.	.	.	.	.	S	F	F	G	P	F	Y	G	G	Y	N	V	I	A	L	D	R	E	Y	R	H	A	L	V	C	G	P	.	.	.	.	.	D	R	D	Y	L	W	I	L	S	R	T	P	T	I	S	D	E	V	K	Q	E	M	L	A	V	A	T	R	E	G	F	D	V
Query Conservation						.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.																		.	.
Template Conservation																																																																		.	.
Template Sequence		T	A	K	Y	K	T	V	D	K	K	K	A	V	L	K	E	A	D	E	K	N	S	Y	T	L	T	V	L	E	A	D	D	S	S	A	L	V	H	I	C	V	R	E	G	S	K	D	L	G	D	V	Y	T	V	L	T	H	Q	K	D	A	E	P	S	.	.	A	K	V	K	S	A	V	T	Q	A	G	L	Q	L
Template Known Secondary structure										T	T									T	T												S	S											T	T												S	S	T	T					.	.										T	T			G
Template Predicted Secondary structure																																																																		.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.			.	.	.	.	150	.	.	.	.	.	.	.	.	.
		167	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	K	F	I	W	V	Q	Q	P	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	Q	F	V	G	T	K	D	L	G
Template Known Secondary structure		G	G	S			G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions