Job Description P0A901 Confidence 100.00% Date Thu Jan 5 11:09:03 GMT 2012 Rank 5 Aligned Residues 151 % Identity 23% Template d1bbpa_ SCOP info Lipocalins Lipocalins Retinol binding protein-like Resolution 2.00

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	T	P	P	R	G	V	T	V	V	N	N	F	D	A	K	R	Y	L	G	T	W	Y	E	I	A	R	F	D	H	R	F	E	R	G	L	E	K	V	T	A	T	Y	S	L	R	D	D	G	G	L	N	V	I	N	K	G	Y	N	P	D	R	G	M	W	Q	Q	S	E	G	K	A	Y	F	T	G	A	P	T	R
Query Conservation
Alig confidence																																															.														.	.
Template Conservation																																															.														.	.
Template Sequence		D	G	A	C	P	E	V	K	P	V	D	N	F	D	W	S	N	Y	H	G	K	W	W	E	V	A	K	Y	P	N	S	V	E	K	Y	G	K	C	G	W	A	E	Y	T	P	.	E	G	K	S	V	K	V	S	N	Y	H	V	I	.	.	H	G	K	E	Y	F	I	E	G	T	A	Y	P	V	G	D	S	K	I
Template Known Secondary structure			S	S								S				G	G	G														S	T	T	T	T											.		S	S											.	.	T	T												S	S		T	T	S
Template Predicted Secondary structure																																															.														.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50		.	.	.	.	.	.	.	.	.	60	.	.	.			.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		102	.	.	.	.	.	.				.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.		.	.	.	.	.	130	.	.	.							.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.		160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure									.	.	.																	.										.	.	.	.	.	.																											.
Query SS confidence									.	.	.																	.										.	.	.	.	.	.																											.
Query Sequence		A	A	L	K	V	S	F	.	.	.	F	G	P	F	Y	G	G	Y	N	V	I	A	L	D	R	E	.	Y	R	H	A	L	V	C	G	P	.	.	.	.	.	.	D	R	D	Y	L	W	I	L	S	R	T	P	T	I	S	D	E	V	K	Q	E	M	L	A	V	A	.	T	R	E	G	F	D	V	S	K	F	I
Query Conservation									.	.	.																	.										.	.	.	.	.	.																											.
Alig confidence									.	.	.																	.										.	.	.	.	.	.																											.
Template Conservation
Template Sequence		G	K	I	Y	H	K	L	T	Y	G	G	V	T	K	E	N	V	F	N	V	L	S	T	D	N	K	N	Y	I	I	G	Y	Y	C	K	Y	D	E	D	K	K	G	H	Q	D	F	V	W	V	L	S	R	S	K	V	L	T	G	E	A	K	T	A	V	E	N	Y	L	I	G	S	P	V	V	D	S	Q	K	L	V
Template Known Secondary structure		S									T	T														S	S	S											T	T	T	T											S	S	S	S																	S	S			G	G	G
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		171	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	V	Q	Q	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	S	D	F	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions