Job Description P0A901 Confidence 99.89% Date Thu Jan 5 11:09:03 GMT 2012 Rank 33 Aligned Residues 140 % Identity 14% Template c3l4rA_ PDB info PDB header:allergen, lipid binding protein Chain: A: PDB Molecule:minor allergen can f 2; PDBTitle: crystal structure of the dog lipocalin allergen can f 2 and2 implications for cross-reactivity to the cat allergen fel d 4 Resolution 1.45 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.					.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.
Query SS confidence																							.	.	.	.
Query Sequence		V	N	N	F	D	A	K	R	Y	L	G	T	W	Y	E	I	A	R	F	D	H	.	.	.	.	R	F	E	R	G	L	E	K	V	T	A	T	Y	S	L	R	D	D	G	G	L	N	V	I	N	K	G	Y	N	P	D	R	G	M	W	Q	Q	S	E	G	K	A	Y	F	T	G	A	P	T	R	A	A	L	K	V
Query Conservation																							.	.	.	.
Alig confidence																							.	.	.	.																														.	.																.	.
Template Conservation																																																								.	.																.	.
Template Sequence		E	P	Q	G	G	L	E	E	L	S	G	R	W	H	S	V	A	L	A	S	N	K	S	D	L	I	K	P	W	G	H	F	R	V	F	I	H	S	M	S	A	K	D	G	N	L	H	G	D	I	L	I	P	Q	.	.	D	G	Q	C	E	K	V	S	L	T	A	F	K	T	A	.	.	T	S	N	K	F	D	L
Template Known Secondary structure					T	T	G	G	G	G												S	S	G	G	G	T	S	T	T		T	T											T	T											.	.	S	S	S												S	.	.	S	T	T
Template Predicted Secondary structure																																																								.	.																.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60			.	.	.	.	.	.	.	.	.	70	.	.	.	.	.			.	.	.	.	80	.	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.		.	.	.	.	.	130	.					.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure																				.								.	.	.	.
Query SS confidence																				.								.	.	.	.
Query Sequence		S	F	F	G	P	F	Y	G	G	Y	N	V	I	A	L	D	R	E	.	Y	R	H	A	L	V	C	.	.	.	.	G	P	D	R	D	Y	L	W	I	L	S	R	T	P	T	I	S	D	E	V	K	Q	E	M	L	A	V	A	T	R	E	G	F	D	V	S	K	F	I	W	V	Q	Q	P	G
Query Conservation																				.								.	.	.	.
Alig confidence						.	.													.								.	.	.	.
Template Conservation						.	.
Template Sequence		E	Y	W	G	.	.	H	N	D	L	Y	L	A	E	V	D	P	K	S	Y	L	I	L	Y	M	I	N	Q	Y	N	D	D	T	S	L	V	A	H	L	M	V	R	D	L	S	R	Q	Q	D	F	L	P	A	F	E	S	V	C	E	D	I	G	L	H	K	D	Q	I	V	V	L	S	D	D	D
Template Known Secondary structure			S	S	S	.	.											T	T	T											T	T											S		G	G	G	T	T	T	T											T	T			G	G	G						T	T	T
Template Predicted Secondary structure						.	.
Template SS confidence
		83	.	.	.			.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions