Job Description P0A901 Confidence 100.00% Date Thu Jan 5 11:09:03 GMT 2012 Rank 2 Aligned Residues 152 % Identity 14% Template c3cqrB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:violaxanthin de-epoxidase, chloroplast; PDBTitle: crystal structure of the lipocalin domain of violaxanthin2 de-epoxidase (vde) at ph5 Resolution 2.00 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure																																																									.
Query SS confidence																																																									.
Query Sequence		P	P	R	G	V	T	V	V	N	N	F	D	A	K	R	Y	L	G	T	W	Y	E	I	A	R	F	D	H	R	F	E	R	G	L	E	K	V	T	A	T	Y	S	L	R	D	D	G	G	L	N	V	I	N	K	G	.	Y	N	P	D	R	G	M	W	Q	Q	S	E	G	K	A	Y	F	T	G	A	P	T	R	A
Query Conservation																																																									.
Alig confidence																																			.																						.
Template Conservation																																			.
Template Sequence		A	P	D	P	S	V	L	V	Q	N	F	N	I	S	D	F	N	G	K	W	Y	I	T	S	G	L	N	P	T	F	D	A	F	.	D	C	Q	L	H	E	F	H	T	E	G	D	N	K	L	V	G	N	I	S	W	R	I	K	T	L	D	S	G	F	F	T	R	S	A	V	Q	K	F	V	Q	D	P	N	Q	P
Template Known Secondary structure					G	G	G	S		S				G	G	G	G										S	S			T	T	T	T	.	S										T	T	T													T	T	S															S	S		T
Template Predicted Secondary structure																																			.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.		.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		103	.	.	.	.	.	.	110	.									.	.	.	.	.	.	.	.	120	.	.	.	.						.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.														.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.														.	.	.	.	.
Query Sequence		A	L	K	V	S	F	F	G	P	.	.	.	.	.	.	.	.	F	Y	G	G	Y	N	V	I	A	L	D	R	E	.	.	.	.	.	Y	R	H	A	L	V	C	G	P	D	R	D	Y	L	W	I	L	S	R	T	P	T	I	S	D	E	V	K	Q	E	M	L	A	V	A	T	R	E	G	F	D	V	S	K	F
Query Conservation											.	.	.	.	.	.	.	.														.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.														.	.	.	.	.
Template Conservation
Template Sequence		G	V	L	Y	N	H	D	N	E	Y	L	H	Y	Q	D	D	W	Y	I	L	S	S	K	I	E	N	K	P	E	D	Y	I	F	V	Y	Y	R	G	R	N	D	A	W	D	G	Y	G	G	A	V	V	Y	T	R	S	S	V	L	P	N	S	I	I	P	E	L	E	K	A	A	K	S	I	G	R	D	F	S	T	F
Template Known Secondary structure		T								G	G	G														S	S	S	T	T												S	S		S										S	S	S	S			G	G	G											T	T			G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	W	V	Q	Q	P	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	R	T	D	N	T	C
Template Known Secondary structure						S	T	T
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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