Job Description P0A901 Confidence 99.82% Date Thu Jan 5 11:09:03 GMT 2012 Rank 36 Aligned Residues 153 % Identity 12% Template c3bx6A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:alpha-1-acid glycoprotein; PDBTitle: crystal structure of human alpha 1 acid glycoprotein Resolution 1.80 Å

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		20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.					.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure												.																							.	.	.	.
Query SS confidence												.																							.	.	.	.
Query Sequence		S	S	P	T	P	P	R	G	V	T	.	V	V	N	N	F	D	A	K	R	Y	L	G	T	W	Y	E	I	A	R	F	D	H	.	.	.	.	R	F	E	R	G	L	E	K	V	T	A	T	Y	S	L	R	D	D	G	G	L	N	V	I	N	K	G	Y	N	P	D	R	G	M	W	Q	Q	S	E	G	K	A	Y
Query Conservation												.																							.	.	.	.
Alig confidence												.																							.	.	.	.
Template Conservation
Template Sequence		Q	I	P	L	C	A	N	L	V	P	V	P	I	T	N	A	T	L	D	Q	I	T	G	K	W	F	Y	I	A	S	A	F	R	N	E	E	Y	N	K	S	V	Q	E	I	Q	A	T	F	F	Y	F	T	P	N	K	T	E	D	T	I	F	L	R	E	Y	Q	T	R	Q	D	Q	C	I	Y	N	T	T	Y	L	N
Template Known Secondary structure							G	G	G																									S	S								T	T												T	T	T	T											T	T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.				.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure																																												.	.	.
Query SS confidence																																												.	.	.
Query Sequence		F	T	G	A	P	T	R	A	A	L	K	V	S	F	F	G	P	F	Y	G	G	Y	N	V	I	A	L	D	R	E	Y	R	H	A	L	V	C	G	P	D	R	D	.	.	.	Y	L	W	I	L	S	R	T	P	T	I	S	D	E	V	K	Q	E	M	L	A	V	A	T	R	E	G	F	D	V	S	K	F	I	W
Query Conservation																																												.	.	.
Alig confidence					.	.						.																																.	.	.
Template Conservation					.	.						.
Template Sequence		V	Q	R	.	.	E	N	G	T	I	.	S	R	Y	V	G	G	Q	E	H	F	A	H	L	L	I	L	R	D	T	K	T	Y	M	L	A	F	D	V	N	D	E	K	N	W	G	L	S	V	Y	A	D	K	P	E	T	T	K	E	Q	L	G	E	F	Y	E	A	L	D	C	L	R	I	P	K	S	D	V	V	Y
Template Known Secondary structure				T	.	.	T	T	T			.					T	T											S	S	T	T								S	S		G	G	G								S	S	S				T	T	T	T											T			G	G	G
Template Predicted Secondary structure					.	.						.
Template SS confidence
		81	.	.			.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		172	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Q	Q	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	D	W	K
Template Known Secondary structure				G	G
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions