Job Description P0A901 Confidence 99.72% Date Thu Jan 5 11:09:03 GMT 2012 Rank 38 Aligned Residues 134 % Identity 17% Template c2r73C_ PDB info PDB header:transport protein Chain: C: PDB Molecule:trichosurin; PDBTitle: crystal structure of the possum milk whey lipocalin2 trichosurin at ph 8.2 Resolution 2.50 Å

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		37	.	.	40	.	.	.	.	.	.	.					.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure													.	.	.	.
Query SS confidence													.	.	.	.
Query Sequence		K	R	Y	L	G	T	W	Y	E	I	A	.	.	.	.	R	F	D	H	R	F	E	R	G	L	E	K	V	T	A	T	Y	S	L	R	D	D	G	G	L	N	V	I	N	K	G	Y	N	P	D	R	G	M	W	Q	Q	S	E	G	K	A	Y	F	T	G	A	P	T	R	A	A	L	K	V	S	F	F	G	P	F
Query Conservation													.	.	.	.
Alig confidence													.	.	.	.																																		.	.																.	.												.	.
Template Conservation																																																		.	.																.	.												.	.
Template Sequence		E	Q	L	S	R	H	W	H	T	V	V	L	A	S	S	D	R	S	L	I	E	E	E	G	P	F	R	N	F	I	Q	N	I	T	V	E	S	G	N	L	N	G	F	F	L	T	R	K	.	.	N	G	Q	C	I	P	L	Y	L	T	A	F	K	T	E	.	.	E	A	R	Q	F	K	L	N	Y	Y	G	.	.
Template Known Secondary structure		G	G	G		S	B									S	S					S	T	T		T	T											T	T											.	.	T	T													S	.	.	S	T	T						S	S	S	.	.
Template Predicted Secondary structure																																																		.	.																.	.												.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.			70	.	.	.	.	.	.	.	.	.	80	.	.	.	.			.	.	.	.	.	90	.	.	.	.	.
		113	.	.	.	.	.	.	120	.	.	.	.		.	.	.	.	.	130					.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure														.							.	.	.	.
Query SS confidence														.							.	.	.	.
Query Sequence		Y	G	G	Y	N	V	I	A	L	D	R	E	.	Y	R	H	A	L	V	.	.	.	.	C	G	P	D	R	D	Y	L	W	I	L	S	R	T	P	T	I	S	D	E	V	K	Q	E	M	L	A	V	A	T	R	E	G	F	D	V	S	K	F	I	W	V	Q	Q	P	G
Query Conservation														.							.	.	.	.
Alig confidence														.							.	.	.	.
Template Conservation
Template Sequence		T	N	D	V	Y	Y	E	S	S	K	P	N	E	Y	A	K	F	I	F	Y	N	Y	H	D	G	K	V	N	V	V	A	N	L	F	G	R	T	P	N	L	S	N	E	I	K	K	R	F	E	E	D	F	M	N	R	G	F	R	R	E	N	I	L	D	I	S	E	V	D
Template Known Secondary structure										S	S	T	T	T											T	T											S	S	S	S															T	T	T			G	G	G				T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions