Job Description P0A901 Confidence 99.95% Date Thu Jan 5 11:09:03 GMT 2012 Rank 18 Aligned Residues 159 % Identity 16% Template c2k23A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:lipocalin 2; PDBTitle: solution structure analysis of the rlcn2 Resolution UNK

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.					.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																																										.	.	.	.
Query SS confidence																																										.	.	.	.
Query Sequence		V	V	A	C	S	S	P	T	P	P	R	G	V	T	V	V	N	N	F	D	A	K	R	Y	L	G	T	W	Y	E	I	A	R	F	D	H	R	F	E	R	.	.	.	.	G	L	E	K	V	T	A	T	Y	S	L	R	D	D	G	G	L	N	V	I	N	K	G	Y	N	P	D	R	G	M	W	Q	Q	S	E	G
Query Conservation																																										.	.	.	.
Alig confidence																																										.	.	.	.																										.	.
Template Conservation																																																																							.	.
Template Sequence		T	Q	N	L	I	P	A	P	P	L	I	S	V	P	L	Q	P	G	F	W	T	E	R	F	Q	G	R	W	F	V	V	G	L	A	G	N	A	V	Q	K	E	R	Q	S	R	F	T	M	Y	S	T	I	Y	E	L	Q	E	D	N	S	Y	N	V	T	S	I	L	V	R	.	.	G	Q	G	C	R	Y	W	I	R
Template Known Secondary structure				S			S				G	G	G	S				T	T			G	G	G	G												T	T	S			S	S	S														T	T	S											.	.	T	T	S
Template Predicted Secondary structure																																																																							.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.			.	.	.	.	.	.	.	80	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.			.	.	120	.	.	.	.						.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure																												.	.								.	.	.	.	.
Query SS confidence																												.	.								.	.	.	.	.
Query Sequence		K	A	Y	F	T	G	A	P	T	R	A	A	L	K	V	S	F	F	G	P	F	Y	G	G	Y	N	.	.	V	I	A	L	D	R	E	.	.	.	.	.	Y	R	H	A	L	V	C	G	P	D	R	D	Y	L	W	I	L	S	R	T	P	T	I	S	D	E	V	K	Q	E	M	L	A	V	A	T	R	E	G	F
Query Conservation																												.	.								.	.	.	.	.
Alig confidence																												.	.								.	.	.	.	.
Template Conservation
Template Sequence		T	F	V	P	S	S	R	P	G	Q	F	T	L	G	N	I	H	S	Y	P	Q	I	Q	S	Y	D	V	Q	V	A	D	T	D	Y	D	Q	F	A	M	V	F	F	Q	K	T	S	E	N	K	Q	Y	F	K	V	T	L	Y	G	R	T	K	G	L	S	D	E	L	K	E	R	F	V	S	F	A	K	S	L	G	L
Template Known Secondary structure							S	S	T	T					T	T	G	G	G		S	S													S	S	S											T	T											S	S	S																	T	T
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		165	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	S	K	F	I	W	V	Q	Q	P	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	D	N	N	I	V	F	S	V	P	T	D
Template Known Secondary structure			G	G	G								S
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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