Job Description P03023 Confidence 99.97% Date Thu Jan 5 10:57:56 GMT 2012 Rank 40 Aligned Residues 253 % Identity 23% Template c3jvdA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulators; PDBTitle: crystal structure of putative transcription regulation repressor (laci2 family) from corynebacterium glutamicum Resolution 2.30 Å

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		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	L	I	G	V	A	T	S	S	L	A	L	H	A	P	S	Q	I	V	A	A	I	K	S	R	A	D	Q	L	G	A	S	V	V	V	S	M	V	E	R	S	G	V	E	A	C	K	A	A	V	H	N	L	L	A	Q	R	V	S	G	L	I	I	N	Y	P	L	D	D	Q	D	A	I	A	V	E	A	A	C
Query Conservation
Alig confidence																																										.	.																													.	.	.	.	.	.	.	.
Template Conservation																																										.	.																													.	.	.	.	.	.	.	.
Template Sequence		S	A	L	V	G	V	I	V	P	D	L	S	N	E	Y	Y	S	E	S	L	Q	T	I	Q	Q	D	L	K	A	A	G	Y	Q	M	L	V	A	E	A	N	.	.	S	V	Q	A	Q	D	V	V	M	E	S	L	I	S	I	Q	A	A	G	I	I	H	V	P	V	V	G	S	.	.	.	.	.	.	.	.	I	A
Template Known Secondary structure										S		S	S	S																		T										.	.	S															T		S								T	T		.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																										.	.																													.	.	.	.	.	.	.	.
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.			.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.									.	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure
Query SS confidence
Query Sequence		T	N	V	P	A	L	F	L	D	V	S	D	Q	T	P	I	N	S	I	I	F	S	H	E	D	G	T	R	L	G	V	E	H	L	V	A	L	G	H	Q	Q	I	A	L	L	A	G	P	L	S	S	V	S	A	R	L	R	L	A	G	W	H	K	Y	L	T	R	N	Q	I	Q	P	I	A	E	R	E	G	D	W
Query Conservation
Alig confidence													.	.	.																																																														.
Template Conservation													.	.	.																																																														.
Template Sequence		E	G	I	P	M	V	Q	L	T	R	P	.	.	.	G	F	P	R	V	L	C	D	D	E	A	G	F	F	Q	L	T	E	S	V	L	G	G	S	G	M	N	I	A	A	L	V	G	E	E	S	L	S	T	T	Q	E	R	M	R	G	I	S	H	A	A	S	I	Y	G	A	E	V	T	F	H	.	F	G	H	Y
Template Known Secondary structure				S									.	.	.		S																					S	S	S								S		T	T	S																	T	T							.				S
Template Predicted Secondary structure													.	.	.																																																														.
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.				.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.		.	.	.	210
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	M	S	G	F	Q	Q	T	M	Q	M	L	N	E	G	I	V	P	T	A	M	L	V	A	N	D	Q	M	A	L	G	A	M	R	A	I	T	E	S	G	L	R	V	G	A	D	I	S	V	V	G	Y	D	D	T	E	D	S	S	C	Y	I	P	P	L	T	T	I	K	Q	D	F	R	L	L	G	Q	T	S
Query Conservation
Alig confidence																.
Template Conservation																.
Template Sequence		S	V	E	S	G	E	E	M	A	Q	V	V	F	N	.	N	G	L	P	D	A	L	I	V	A	S	P	R	L	M	A	G	V	M	R	A	F	T	R	L	N	V	R	V	P	H	D	V	V	I	G	G	Y	D	D	P	E	W	Y	S	F	V	G	A	G	I	T	T	F	V	P	P	H	E	E	M	G	K	E	A
Template Known Secondary structure		S														.	T				S																				T	T			T	T	T	T							S			G	G	G	G	G	S	T	T	S
Template Predicted Secondary structure																.
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.		.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	R	L	L	Q	L	S	Q	G	Q	A	V	K	G	N	Q	L	L	P	V	S	L	V	K	R	K	T	T
Query Conservation
Alig confidence														.
Template Conservation														.
Template Sequence		V	R	L	L	V	D	L	I	E	N	P	E	.	T	G	D	V	V	L	Q	G	Q	V	I	L	R	G	S	S
Template Known Secondary structure											S			.														G	G	G
Template Predicted Secondary structure														.
Template SS confidence
		294	.	.	.	.	.	300	.	.	.	.	.		.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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