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Job DescriptionP03023
Confidence100.00%DateThu Jan 5 10:57:56 GMT 2012
Rank20Aligned Residues272
% Identity13%Templatec3hcwB_
PDB info PDB header:rna binding proteinChain: B: PDB Molecule:maltose operon transcriptional repressor; PDBTitle: crystal structure of probable maltose operon transcriptional repressor2 malr from staphylococcus areus
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   58.60.........70 .........80.........90.........100.........110.........120.........130..
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Query Sequence  GKQSLLIGVATSS. . . . . LALHAPSQIVAAIKSRADQLGASVVVSMVERSGVEACKAAVHNLLAQRVSGLIINYPLDDQD
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Template Sequence  TNQTYKIGLVLKGSEEPIRLNPFYINVLLGISETCNQHGYGTQTTVS. NNMNDLMDEVYKMIKQRMVDAFILLYSKENDP
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   56...60.........70.........80.........90.........100.. .......110.........120.........130....
 
   133......140.........150.. .......160.........170.........180.........190.........200.........210
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Query Sequence  AIAVEAACTNVPALFLDVSD. . QTPINSIIFSHEDGTRLGVEHLVALGHQQIALLAGPLSSVSARLRLAGWHKYLTRNQI
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Template Sequence  IKQMLIDESMPFIVIGKPTSDIDHQFTHIDNDNILASENLTRHVIEQGVDELIFITEKGNFEVSKDRIQGFETVASQFNL
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   135....140.........150.........160.........170.........180.........190.........200.........210....
 
   211........220.. .......230.........240.........250.........260.........270.........280........
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Query Sequence  QPIAEREGDWSA. . MSGFQQTMQMLNEGIVPTAMLVANDQMALGAMRAITESGLRVGADISVVGYDDTEDSSCYIPPLTT
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Template Sequence  DYQIIETSNEREVILNYMQNLHTRLKDPNIKQAIISLDAMLHLAILSVLYELNIEIPKDVMTATFNDSYLTEIASPPQTC
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   215....220.........230.........240.........250.........260.........270.........280.........290....
 
   289290.........300.........310.........320.........330.
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Query Sequence  IKQDFRLLGQTSVDRLLQLSQGQAVKGNQLLPVSLVKRKTTLA
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Template Sequence  IDIKPRMLGQQAGSAILNILKNDVIE. LVIIDTELKIRKSTQR
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   295....300.........310.........320 .........330......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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